RNA–Protein interactions for RNA: ENST00000505980.5

SSBP2-205, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-205ENST00000505980 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SSBP2-205ENST00000505980 USH2AO75445 5202 aa3.74□□□□□ -1.81
SSBP2-205ENST00000505980 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
SSBP2-205ENST00000505980 MT1XP80297 61 aa3.73□□□□□ -1.81
SSBP2-205ENST00000505980 KRTAP10-12P60413 245 aa3.68□□□□□ -1.82
SSBP2-205ENST00000505980 TNP1P09430 55 aa3.65□□□□□ -1.82
SSBP2-205ENST00000505980 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
SSBP2-205ENST00000505980 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
SSBP2-205ENST00000505980 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
SSBP2-205ENST00000505980 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.84
SSBP2-205ENST00000505980 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
SSBP2-205ENST00000505980 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
SSBP2-205ENST00000505980 FSIP2Q5CZC0 6907 aa3.47□□□□□ -1.85
SSBP2-205ENST00000505980 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
SSBP2-205ENST00000505980 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
SSBP2-205ENST00000505980 KMT2DO14686 5537 aa3.45□□□□□ -1.86
SSBP2-205ENST00000505980 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
SSBP2-205ENST00000505980 CRCT1Q9UGL9 99 aa3.39□□□□□ -1.87
SSBP2-205ENST00000505980 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
SSBP2-205ENST00000505980 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
SSBP2-205ENST00000505980 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.88
SSBP2-205ENST00000505980 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
SSBP2-205ENST00000505980 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
SSBP2-205ENST00000505980 MT1EP04732 61 aa3.27□□□□□ -1.89
SSBP2-205ENST00000505980 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
SSBP2-205ENST00000505980 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
SSBP2-205ENST00000505980 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
SSBP2-205ENST00000505980 MT1LQ93083 61 aa3.2□□□□□ -1.9
SSBP2-205ENST00000505980 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
SSBP2-205ENST00000505980 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
SSBP2-205ENST00000505980 SPRR2FQ96RM1 72 aa3.16□□□□□ -1.9
SSBP2-205ENST00000505980 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.9
SSBP2-205ENST00000505980 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
SSBP2-205ENST00000505980 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
SSBP2-205ENST00000505980 MT1GP13640 62 aa3.09□□□□□ -1.91
SSBP2-205ENST00000505980 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
SSBP2-205ENST00000505980 MT1MQ8N339 61 aa3.07□□□□□ -1.92
SSBP2-205ENST00000505980 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
SSBP2-205ENST00000505980 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
SSBP2-205ENST00000505980 SPRR2EP22531 72 aa2.99□□□□□ -1.93
SSBP2-205ENST00000505980 SPRR2BP35325 72 aa2.99□□□□□ -1.93
SSBP2-205ENST00000505980 SPRR2AP35326 72 aa2.99□□□□□ -1.93
SSBP2-205ENST00000505980 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
SSBP2-205ENST00000505980 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
SSBP2-205ENST00000505980 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
SSBP2-205ENST00000505980 SPRR2DP22532 72 aa2.88□□□□□ -1.95
SSBP2-205ENST00000505980 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.96
SSBP2-205ENST00000505980 NEBP20929 6669 aa2.83□□□□□ -1.96
SSBP2-205ENST00000505980 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
SSBP2-205ENST00000505980 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
SSBP2-205ENST00000505980 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.97
SSBP2-205ENST00000505980 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
SSBP2-205ENST00000505980 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
SSBP2-205ENST00000505980 MT1AP04731 61 aa2.72□□□□□ -1.97
SSBP2-205ENST00000505980 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
SSBP2-205ENST00000505980 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
SSBP2-205ENST00000505980 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -1.99
SSBP2-205ENST00000505980 MT4P47944 62 aa2.5□□□□□ -2.01
SSBP2-205ENST00000505980 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
SSBP2-205ENST00000505980 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
SSBP2-205ENST00000505980 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
SSBP2-205ENST00000505980 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
SSBP2-205ENST00000505980 PRM1P04553 51 aa2.42□□□□□ -2.02
SSBP2-205ENST00000505980 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
SSBP2-205ENST00000505980 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
SSBP2-205ENST00000505980 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.07
SSBP2-205ENST00000505980 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
SSBP2-205ENST00000505980 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
SSBP2-205ENST00000505980 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
SSBP2-205ENST00000505980 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
SSBP2-205ENST00000505980 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
SSBP2-205ENST00000505980 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SSBP2-205ENST00000505980 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
SSBP2-205ENST00000505980 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
SSBP2-205ENST00000505980 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
SSBP2-205ENST00000505980 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
SSBP2-205ENST00000505980 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 85.8 ms