RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
KDM3B-203ENST00000505756 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
KDM3B-203ENST00000505756 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
KDM3B-203ENST00000505756 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
KDM3B-203ENST00000505756 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
KDM3B-203ENST00000505756 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
KDM3B-203ENST00000505756 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
KDM3B-203ENST00000505756 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
KDM3B-203ENST00000505756 TNP1P09430 55 aa4.4□□□□□ -1.71
KDM3B-203ENST00000505756 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
KDM3B-203ENST00000505756 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
KDM3B-203ENST00000505756 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
KDM3B-203ENST00000505756 SPRR2DP22532 72 aa4.36□□□□□ -1.71
KDM3B-203ENST00000505756 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
KDM3B-203ENST00000505756 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
KDM3B-203ENST00000505756 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
KDM3B-203ENST00000505756 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
KDM3B-203ENST00000505756 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
KDM3B-203ENST00000505756 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
KDM3B-203ENST00000505756 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
KDM3B-203ENST00000505756 MT1EP04732 61 aa4.24□□□□□ -1.73
KDM3B-203ENST00000505756 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
KDM3B-203ENST00000505756 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
KDM3B-203ENST00000505756 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
KDM3B-203ENST00000505756 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
KDM3B-203ENST00000505756 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
KDM3B-203ENST00000505756 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.74
KDM3B-203ENST00000505756 MT1GP13640 62 aa4.11□□□□□ -1.75
KDM3B-203ENST00000505756 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
KDM3B-203ENST00000505756 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
KDM3B-203ENST00000505756 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
KDM3B-203ENST00000505756 MT1LQ93083 61 aa4.06□□□□□ -1.76
KDM3B-203ENST00000505756 MT1MQ8N339 61 aa4.03□□□□□ -1.76
KDM3B-203ENST00000505756 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
KDM3B-203ENST00000505756 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
KDM3B-203ENST00000505756 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
KDM3B-203ENST00000505756 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
KDM3B-203ENST00000505756 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
KDM3B-203ENST00000505756 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
KDM3B-203ENST00000505756 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
KDM3B-203ENST00000505756 MT4P47944 62 aa3.79□□□□□ -1.8
KDM3B-203ENST00000505756 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
KDM3B-203ENST00000505756 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
KDM3B-203ENST00000505756 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
KDM3B-203ENST00000505756 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
KDM3B-203ENST00000505756 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
KDM3B-203ENST00000505756 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
KDM3B-203ENST00000505756 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
KDM3B-203ENST00000505756 MT3P25713 68 aa3.55□□□□□ -1.84
KDM3B-203ENST00000505756 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
KDM3B-203ENST00000505756 MT1AP04731 61 aa3.46□□□□□ -1.86
KDM3B-203ENST00000505756 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
KDM3B-203ENST00000505756 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
KDM3B-203ENST00000505756 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
KDM3B-203ENST00000505756 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
KDM3B-203ENST00000505756 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
KDM3B-203ENST00000505756 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
KDM3B-203ENST00000505756 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
KDM3B-203ENST00000505756 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
KDM3B-203ENST00000505756 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
KDM3B-203ENST00000505756 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
KDM3B-203ENST00000505756 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
KDM3B-203ENST00000505756 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
KDM3B-203ENST00000505756 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
KDM3B-203ENST00000505756 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
KDM3B-203ENST00000505756 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
KDM3B-203ENST00000505756 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
KDM3B-203ENST00000505756 INE1O15225 51 aa2.74□□□□□ -1.97
KDM3B-203ENST00000505756 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
KDM3B-203ENST00000505756 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
KDM3B-203ENST00000505756 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
KDM3B-203ENST00000505756 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
KDM3B-203ENST00000505756 PRM1P04553 51 aa2.29□□□□□ -2.04
KDM3B-203ENST00000505756 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
KDM3B-203ENST00000505756 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
KDM3B-203ENST00000505756 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
KDM3B-203ENST00000505756 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
KDM3B-203ENST00000505756 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 43 ms