RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
SPOP-208ENST00000504889 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
SPOP-208ENST00000504889 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
SPOP-208ENST00000504889 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
SPOP-208ENST00000504889 KRTAP23-1A1A580 65 aa2.28□□□□□ -2.04
SPOP-208ENST00000504889 LINC01558Q9Y6Z2 57 aa2.27□□□□□ -2.05
SPOP-208ENST00000504889 UQCR11O14957 56 aa2.26□□□□□ -2.05
SPOP-208ENST00000504889 TNP1P09430 55 aa2.24□□□□□ -2.05
SPOP-208ENST00000504889 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
SPOP-208ENST00000504889 V9GYY9 64 aa2.24□□□□□ -2.05
SPOP-208ENST00000504889 K7ERS5 55 aa2.23□□□□□ -2.05
SPOP-208ENST00000504889 KRTAP2-2Q9BYT5 123 aa2.23□□□□□ -2.05
SPOP-208ENST00000504889 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
SPOP-208ENST00000504889 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
SPOP-208ENST00000504889 PSPHP1O15172 72 aa2.21□□□□□ -2.06
SPOP-208ENST00000504889 KRTAP15-1Q3LI76 137 aa2.2□□□□□ -2.06
SPOP-208ENST00000504889 A0A0A0MQY5 61 aa2.19□□□□□ -2.06
SPOP-208ENST00000504889 MT1EP04732 61 aa2.19□□□□□ -2.06
SPOP-208ENST00000504889 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
SPOP-208ENST00000504889 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
SPOP-208ENST00000504889 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
SPOP-208ENST00000504889 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
SPOP-208ENST00000504889 LCE3AQ5TA76 89 aa2.18□□□□□ -2.06
SPOP-208ENST00000504889 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
SPOP-208ENST00000504889 PP632Q6XCG6 107 aa2.17□□□□□ -2.06
SPOP-208ENST00000504889 A6NED7 52 aa2.16□□□□□ -2.06
SPOP-208ENST00000504889 RPS28P62857 69 aaKnown RBP2.15□□□□□ -2.07
SPOP-208ENST00000504889 Q1T7F1 81 aa2.15□□□□□ -2.07
SPOP-208ENST00000504889 MT1GP13640 62 aa2.13□□□□□ -2.07
SPOP-208ENST00000504889 KRTAP25-1Q3LHN0 102 aa2.11□□□□□ -2.07
SPOP-208ENST00000504889 MT1LQ93083 61 aa2.11□□□□□ -2.07
SPOP-208ENST00000504889 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
SPOP-208ENST00000504889 MT1MQ8N339 61 aa2.09□□□□□ -2.07
SPOP-208ENST00000504889 CDC42SE1Q9NRR8 79 aa2.08□□□□□ -2.08
SPOP-208ENST00000504889 PRO0628Q9UI54 55 aa2.07□□□□□ -2.08
SPOP-208ENST00000504889 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
SPOP-208ENST00000504889 MT4P47944 62 aa2.03□□□□□ -2.08
SPOP-208ENST00000504889 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
SPOP-208ENST00000504889 ROMO1P60602 79 aa2.02□□□□□ -2.09
SPOP-208ENST00000504889 PMAIP1Q13794 54 aa2.01□□□□□ -2.09
SPOP-208ENST00000504889 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
SPOP-208ENST00000504889 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
SPOP-208ENST00000504889 OBSCNQ5VST9 7968 aa1.93□□□□□ -2.1
SPOP-208ENST00000504889 LCE3CQ5T5A8 94 aa1.92□□□□□ -2.1
SPOP-208ENST00000504889 BRK1Q8WUW1 75 aa1.91□□□□□ -2.1
SPOP-208ENST00000504889 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
SPOP-208ENST00000504889 KRTAP5-5Q701N2 237 aaPredicted RBP1.87□□□□□ -2.11
SPOP-208ENST00000504889 KTN1-AS1Q86SY8 53 aa1.87□□□□□ -2.11
SPOP-208ENST00000504889 PRAC1Q96KF2 57 aa1.86□□□□□ -2.11
SPOP-208ENST00000504889 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
SPOP-208ENST00000504889 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
SPOP-208ENST00000504889 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.11
SPOP-208ENST00000504889 SPRR5A0A1B0GTR4 108 aa1.84□□□□□ -2.11
SPOP-208ENST00000504889 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
SPOP-208ENST00000504889 MT1AP04731 61 aa1.79□□□□□ -2.12
SPOP-208ENST00000504889 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
SPOP-208ENST00000504889 LUZP6Q538Z0 58 aa1.78□□□□□ -2.12
SPOP-208ENST00000504889 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
SPOP-208ENST00000504889 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
SPOP-208ENST00000504889 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
SPOP-208ENST00000504889 LCE1EQ5T753 118 aa1.71□□□□□ -2.14
SPOP-208ENST00000504889 MT3P25713 68 aa1.69□□□□□ -2.14
SPOP-208ENST00000504889 NDUFAF8A1L188 74 aa1.68□□□□□ -2.14
SPOP-208ENST00000504889 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
SPOP-208ENST00000504889 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
SPOP-208ENST00000504889 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
SPOP-208ENST00000504889 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
SPOP-208ENST00000504889 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
SPOP-208ENST00000504889 LCE3DQ9BYE3 92 aa1.42□□□□□ -2.18
SPOP-208ENST00000504889 LCE1CQ5T751 118 aa1.37□□□□□ -2.19
SPOP-208ENST00000504889 INE1O15225 51 aa1.36□□□□□ -2.19
SPOP-208ENST00000504889 LCE3EQ5T5B0 92 aa1.34□□□□□ -2.19
SPOP-208ENST00000504889 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
SPOP-208ENST00000504889 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
SPOP-208ENST00000504889 PRM1P04553 51 aa1.04□□□□□ -2.24
SPOP-208ENST00000504889 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.24
SPOP-208ENST00000504889 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
SPOP-208ENST00000504889 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms