RNA–Protein interactions for RNA: ENST00000504878.1

CCNH-203, Transcript of cyclin H, humanhuman

TSL 1 (best) BASIC

Gene CCNH, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-203ENST00000504878 PRR15LQ9BU68 103 aa4.49□□□□□ -1.69
CCNH-203ENST00000504878 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
CCNH-203ENST00000504878 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
CCNH-203ENST00000504878 MT1EP04732 61 aa4.48□□□□□ -1.69
CCNH-203ENST00000504878 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
CCNH-203ENST00000504878 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
CCNH-203ENST00000504878 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
CCNH-203ENST00000504878 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
CCNH-203ENST00000504878 UQCR11O14957 56 aa4.37□□□□□ -1.71
CCNH-203ENST00000504878 TNP1P09430 55 aa4.35□□□□□ -1.71
CCNH-203ENST00000504878 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
CCNH-203ENST00000504878 MT1GP13640 62 aa4.3□□□□□ -1.72
CCNH-203ENST00000504878 MT1LQ93083 61 aa4.29□□□□□ -1.72
CCNH-203ENST00000504878 MIR22HGQ0VDD5 57 aa4.27□□□□□ -1.73
CCNH-203ENST00000504878 MT1MQ8N339 61 aa4.25□□□□□ -1.73
CCNH-203ENST00000504878 Q1T7F1 81 aa4.24□□□□□ -1.73
CCNH-203ENST00000504878 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
CCNH-203ENST00000504878 PSPHP1O15172 72 aa4.24□□□□□ -1.73
CCNH-203ENST00000504878 V9GYY9 64 aa4.24□□□□□ -1.73
CCNH-203ENST00000504878 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
CCNH-203ENST00000504878 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
CCNH-203ENST00000504878 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
CCNH-203ENST00000504878 K7ERS5 55 aa4.15□□□□□ -1.75
CCNH-203ENST00000504878 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
CCNH-203ENST00000504878 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
CCNH-203ENST00000504878 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
CCNH-203ENST00000504878 A6NED7 52 aa4.08□□□□□ -1.76
CCNH-203ENST00000504878 PCP4P48539 62 aa4.06□□□□□ -1.76
CCNH-203ENST00000504878 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
CCNH-203ENST00000504878 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
CCNH-203ENST00000504878 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
CCNH-203ENST00000504878 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
CCNH-203ENST00000504878 MT4P47944 62 aa4□□□□□ -1.77
CCNH-203ENST00000504878 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
CCNH-203ENST00000504878 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
CCNH-203ENST00000504878 ROMO1P60602 79 aa3.91□□□□□ -1.78
CCNH-203ENST00000504878 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
CCNH-203ENST00000504878 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
CCNH-203ENST00000504878 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
CCNH-203ENST00000504878 SVIPQ8NHG7 77 aa3.82□□□□□ -1.8
CCNH-203ENST00000504878 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
CCNH-203ENST00000504878 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
CCNH-203ENST00000504878 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
CCNH-203ENST00000504878 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
CCNH-203ENST00000504878 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
CCNH-203ENST00000504878 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
CCNH-203ENST00000504878 MT1AP04731 61 aa3.64□□□□□ -1.83
CCNH-203ENST00000504878 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
CCNH-203ENST00000504878 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
CCNH-203ENST00000504878 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
CCNH-203ENST00000504878 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
CCNH-203ENST00000504878 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
CCNH-203ENST00000504878 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
CCNH-203ENST00000504878 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
CCNH-203ENST00000504878 PMAIP1Q13794 54 aa3.34□□□□□ -1.88
CCNH-203ENST00000504878 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
CCNH-203ENST00000504878 MT3P25713 68 aa3.32□□□□□ -1.88
CCNH-203ENST00000504878 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
CCNH-203ENST00000504878 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
CCNH-203ENST00000504878 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
CCNH-203ENST00000504878 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
CCNH-203ENST00000504878 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
CCNH-203ENST00000504878 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.93
CCNH-203ENST00000504878 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
CCNH-203ENST00000504878 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.96
CCNH-203ENST00000504878 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
CCNH-203ENST00000504878 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
CCNH-203ENST00000504878 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
CCNH-203ENST00000504878 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
CCNH-203ENST00000504878 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
CCNH-203ENST00000504878 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
CCNH-203ENST00000504878 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
CCNH-203ENST00000504878 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
CCNH-203ENST00000504878 PRM1P04553 51 aa2.01□□□□□ -2.09
CCNH-203ENST00000504878 INE1O15225 51 aa1.91□□□□□ -2.1
CCNH-203ENST00000504878 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
CCNH-203ENST00000504878 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 107.6 ms