RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
NPIPB3-203ENST00000504841 H7BZZ5 65 aa2.53□□□□□ -2
NPIPB3-203ENST00000504841 CAMK2N1Q7Z7J9 78 aa2.53□□□□□ -2
NPIPB3-203ENST00000504841 ANAPC13Q9BS18 74 aa2.53□□□□□ -2
NPIPB3-203ENST00000504841 COA5Q86WW8 74 aa2.52□□□□□ -2.01
NPIPB3-203ENST00000504841 SEC61GP60059 68 aa2.51□□□□□ -2.01
NPIPB3-203ENST00000504841 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
NPIPB3-203ENST00000504841 MT1GP13640 62 aa2.49□□□□□ -2.01
NPIPB3-203ENST00000504841 SERP1Q9Y6X1 66 aa2.49□□□□□ -2.01
NPIPB3-203ENST00000504841 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
NPIPB3-203ENST00000504841 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
NPIPB3-203ENST00000504841 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
NPIPB3-203ENST00000504841 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
NPIPB3-203ENST00000504841 MT1MQ8N339 61 aa2.47□□□□□ -2.01
NPIPB3-203ENST00000504841 ATP5EP56381 51 aaPredicted RBP2.46□□□□□ -2.02
NPIPB3-203ENST00000504841 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
NPIPB3-203ENST00000504841 A0A0D9SG42 100 aa2.45□□□□□ -2.02
NPIPB3-203ENST00000504841 A0A1B0GU33 70 aa2.45□□□□□ -2.02
NPIPB3-203ENST00000504841 CCDC179H3BU77 68 aa2.44□□□□□ -2.02
NPIPB3-203ENST00000504841 KRTAP13-4Q3LI77 160 aa2.44□□□□□ -2.02
NPIPB3-203ENST00000504841 A0A1B0GU69 56 aa2.42□□□□□ -2.02
NPIPB3-203ENST00000504841 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
NPIPB3-203ENST00000504841 MT1LQ93083 61 aa2.42□□□□□ -2.02
NPIPB3-203ENST00000504841 PRAC1Q96KF2 57 aa2.42□□□□□ -2.02
NPIPB3-203ENST00000504841 TMEM258P61165 79 aa2.4□□□□□ -2.03
NPIPB3-203ENST00000504841 SMIM26A0A096LP01 95 aa2.39□□□□□ -2.03
NPIPB3-203ENST00000504841 SPATA8Q6RVD6 105 aa2.39□□□□□ -2.03
NPIPB3-203ENST00000504841 PRR15LQ9BU68 103 aa2.39□□□□□ -2.03
NPIPB3-203ENST00000504841 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
NPIPB3-203ENST00000504841 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
NPIPB3-203ENST00000504841 LINC01558Q9Y6Z2 57 aa2.36□□□□□ -2.03
NPIPB3-203ENST00000504841 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
NPIPB3-203ENST00000504841 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
NPIPB3-203ENST00000504841 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
NPIPB3-203ENST00000504841 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
NPIPB3-203ENST00000504841 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
NPIPB3-203ENST00000504841 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
NPIPB3-203ENST00000504841 UQCR11O14957 56 aa2.31□□□□□ -2.04
NPIPB3-203ENST00000504841 A8MU10 97 aa2.3□□□□□ -2.04
NPIPB3-203ENST00000504841 V9GYY9 64 aa2.3□□□□□ -2.04
NPIPB3-203ENST00000504841 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
NPIPB3-203ENST00000504841 TNP1P09430 55 aa2.26□□□□□ -2.05
NPIPB3-203ENST00000504841 Q1T7F1 81 aa2.26□□□□□ -2.05
NPIPB3-203ENST00000504841 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
NPIPB3-203ENST00000504841 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
NPIPB3-203ENST00000504841 RPS28P62857 69 aaKnown RBP2.24□□□□□ -2.05
NPIPB3-203ENST00000504841 MIR22HGQ0VDD5 57 aa2.24□□□□□ -2.05
NPIPB3-203ENST00000504841 K7ERS5 55 aa2.22□□□□□ -2.05
NPIPB3-203ENST00000504841 PSPHP1O15172 72 aa2.21□□□□□ -2.06
NPIPB3-203ENST00000504841 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
NPIPB3-203ENST00000504841 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
NPIPB3-203ENST00000504841 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
NPIPB3-203ENST00000504841 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
NPIPB3-203ENST00000504841 KRTAP25-1Q3LHN0 102 aa2.18□□□□□ -2.06
NPIPB3-203ENST00000504841 A6NED7 52 aa2.15□□□□□ -2.07
NPIPB3-203ENST00000504841 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
NPIPB3-203ENST00000504841 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
NPIPB3-203ENST00000504841 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
NPIPB3-203ENST00000504841 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
NPIPB3-203ENST00000504841 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
NPIPB3-203ENST00000504841 MT1AP04731 61 aa2.06□□□□□ -2.08
NPIPB3-203ENST00000504841 ROMO1P60602 79 aa2.06□□□□□ -2.08
NPIPB3-203ENST00000504841 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
NPIPB3-203ENST00000504841 BRK1Q8WUW1 75 aa1.9□□□□□ -2.11
NPIPB3-203ENST00000504841 PRO0628Q9UI54 55 aa1.85□□□□□ -2.11
NPIPB3-203ENST00000504841 PMAIP1Q13794 54 aa1.83□□□□□ -2.12
NPIPB3-203ENST00000504841 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
NPIPB3-203ENST00000504841 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
NPIPB3-203ENST00000504841 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
NPIPB3-203ENST00000504841 KTN1-AS1Q86SY8 53 aa1.7□□□□□ -2.14
NPIPB3-203ENST00000504841 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
NPIPB3-203ENST00000504841 LUZP6Q538Z0 58 aa1.49□□□□□ -2.17
NPIPB3-203ENST00000504841 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
NPIPB3-203ENST00000504841 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
NPIPB3-203ENST00000504841 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
NPIPB3-203ENST00000504841 INE1O15225 51 aa1.12□□□□□ -2.23
NPIPB3-203ENST00000504841 PRM1P04553 51 aa1.02□□□□□ -2.25
NPIPB3-203ENST00000504841 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 40.1 ms