RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 K7ERS5 55 aa3.8□□□□□ -1.8
CDH6-202ENST00000504835 SPRR2GQ9BYE4 73 aa3.8□□□□□ -1.8
CDH6-202ENST00000504835 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
CDH6-202ENST00000504835 A8MU10 97 aa3.76□□□□□ -1.81
CDH6-202ENST00000504835 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
CDH6-202ENST00000504835 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
CDH6-202ENST00000504835 LINC01554Q52M75 96 aa3.72□□□□□ -1.81
CDH6-202ENST00000504835 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
CDH6-202ENST00000504835 S4R3F8 94 aa3.72□□□□□ -1.81
CDH6-202ENST00000504835 CSAG1Q6PB30 78 aa3.69□□□□□ -1.82
CDH6-202ENST00000504835 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
CDH6-202ENST00000504835 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.82
CDH6-202ENST00000504835 SPRR2EP22531 72 aa3.64□□□□□ -1.83
CDH6-202ENST00000504835 SPRR2BP35325 72 aa3.64□□□□□ -1.83
CDH6-202ENST00000504835 SPRR2AP35326 72 aa3.64□□□□□ -1.83
CDH6-202ENST00000504835 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
CDH6-202ENST00000504835 A0A1B0GU33 70 aa3.62□□□□□ -1.83
CDH6-202ENST00000504835 CRIPTQ9P021 101 aa3.6□□□□□ -1.83
CDH6-202ENST00000504835 MT1XP80297 61 aa3.59□□□□□ -1.84
CDH6-202ENST00000504835 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
CDH6-202ENST00000504835 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
CDH6-202ENST00000504835 H0YAA0 97 aa3.52□□□□□ -1.85
CDH6-202ENST00000504835 SPRR2DP22532 72 aa3.52□□□□□ -1.85
CDH6-202ENST00000504835 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
CDH6-202ENST00000504835 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
CDH6-202ENST00000504835 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
CDH6-202ENST00000504835 PRO2289Q9P1D8 64 aa3.51□□□□□ -1.85
CDH6-202ENST00000504835 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
CDH6-202ENST00000504835 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.85
CDH6-202ENST00000504835 ROMO1P60602 79 aa3.45□□□□□ -1.86
CDH6-202ENST00000504835 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
CDH6-202ENST00000504835 P0C880 135 aa3.4□□□□□ -1.87
CDH6-202ENST00000504835 SPINT4Q6UDR6 99 aa3.38□□□□□ -1.87
CDH6-202ENST00000504835 R4GN34 69 aa3.38□□□□□ -1.87
CDH6-202ENST00000504835 A0A0D9SG42 100 aa3.38□□□□□ -1.87
CDH6-202ENST00000504835 M0QZ58 72 aa3.37□□□□□ -1.87
CDH6-202ENST00000504835 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
CDH6-202ENST00000504835 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
CDH6-202ENST00000504835 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
CDH6-202ENST00000504835 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.89
CDH6-202ENST00000504835 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
CDH6-202ENST00000504835 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
CDH6-202ENST00000504835 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
CDH6-202ENST00000504835 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
CDH6-202ENST00000504835 MT1EP04732 61 aa3.18□□□□□ -1.9
CDH6-202ENST00000504835 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
CDH6-202ENST00000504835 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
CDH6-202ENST00000504835 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
CDH6-202ENST00000504835 MT4P47944 62 aa3.11□□□□□ -1.91
CDH6-202ENST00000504835 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
CDH6-202ENST00000504835 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
CDH6-202ENST00000504835 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
CDH6-202ENST00000504835 MT1GP13640 62 aa3.07□□□□□ -1.92
CDH6-202ENST00000504835 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
CDH6-202ENST00000504835 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
CDH6-202ENST00000504835 MT1MQ8N339 61 aa3.04□□□□□ -1.92
CDH6-202ENST00000504835 TNP1P09430 55 aa3.02□□□□□ -1.93
CDH6-202ENST00000504835 MT1LQ93083 61 aa3□□□□□ -1.93
CDH6-202ENST00000504835 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
CDH6-202ENST00000504835 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
CDH6-202ENST00000504835 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
CDH6-202ENST00000504835 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
CDH6-202ENST00000504835 INE1O15225 51 aa2.78□□□□□ -1.96
CDH6-202ENST00000504835 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
CDH6-202ENST00000504835 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
CDH6-202ENST00000504835 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CDH6-202ENST00000504835 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
CDH6-202ENST00000504835 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
CDH6-202ENST00000504835 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
CDH6-202ENST00000504835 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
CDH6-202ENST00000504835 MT1AP04731 61 aa2.54□□□□□ -2
CDH6-202ENST00000504835 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
CDH6-202ENST00000504835 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
CDH6-202ENST00000504835 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
CDH6-202ENST00000504835 PRM1P04553 51 aa1.79□□□□□ -2.12
CDH6-202ENST00000504835 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
CDH6-202ENST00000504835 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.2
CDH6-202ENST00000504835 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 51.1 ms