RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 A8MU10 97 aa3.19□□□□□ -1.9
RFC1-207ENST00000504554 COA5Q86WW8 74 aa3.19□□□□□ -1.9
RFC1-207ENST00000504554 COX7CP15954 63 aa3.18□□□□□ -1.9
RFC1-207ENST00000504554 SPRR2EP22531 72 aa3.18□□□□□ -1.9
RFC1-207ENST00000504554 SPRR2BP35325 72 aa3.18□□□□□ -1.9
RFC1-207ENST00000504554 SPRR2AP35326 72 aa3.18□□□□□ -1.9
RFC1-207ENST00000504554 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
RFC1-207ENST00000504554 H7BZZ5 65 aa3.16□□□□□ -1.9
RFC1-207ENST00000504554 TMEM258P61165 79 aa3.13□□□□□ -1.91
RFC1-207ENST00000504554 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
RFC1-207ENST00000504554 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
RFC1-207ENST00000504554 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
RFC1-207ENST00000504554 CCDC179H3BU77 68 aa3.11□□□□□ -1.91
RFC1-207ENST00000504554 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
RFC1-207ENST00000504554 K7ERS5 55 aa3.1□□□□□ -1.91
RFC1-207ENST00000504554 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
RFC1-207ENST00000504554 A0A0D9SG42 100 aa3.09□□□□□ -1.91
RFC1-207ENST00000504554 SPRR2DP22532 72 aa3.07□□□□□ -1.92
RFC1-207ENST00000504554 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
RFC1-207ENST00000504554 SERP1Q9Y6X1 66 aa3.07□□□□□ -1.92
RFC1-207ENST00000504554 A0A1B0GU33 70 aa3.06□□□□□ -1.92
RFC1-207ENST00000504554 A6NED7 52 aa3.05□□□□□ -1.92
RFC1-207ENST00000504554 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
RFC1-207ENST00000504554 KRTAP19-7Q3SYF9 63 aa3.03□□□□□ -1.92
RFC1-207ENST00000504554 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
RFC1-207ENST00000504554 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
RFC1-207ENST00000504554 A0A1B0GU69 56 aa2.99□□□□□ -1.93
RFC1-207ENST00000504554 MT1EP04732 61 aa2.99□□□□□ -1.93
RFC1-207ENST00000504554 ATP5EP56381 51 aaPredicted RBP2.96□□□□□ -1.94
RFC1-207ENST00000504554 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
RFC1-207ENST00000504554 KRTAP19-5Q3LI72 72 aa2.95□□□□□ -1.94
RFC1-207ENST00000504554 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
RFC1-207ENST00000504554 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
RFC1-207ENST00000504554 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
RFC1-207ENST00000504554 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
RFC1-207ENST00000504554 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
RFC1-207ENST00000504554 LINC01558Q9Y6Z2 57 aa2.92□□□□□ -1.94
RFC1-207ENST00000504554 KRTAP25-1Q3LHN0 102 aa2.87□□□□□ -1.95
RFC1-207ENST00000504554 PRR15LQ9BU68 103 aa2.86□□□□□ -1.95
RFC1-207ENST00000504554 MT1GP13640 62 aa2.85□□□□□ -1.95
RFC1-207ENST00000504554 MT1LQ93083 61 aa2.85□□□□□ -1.95
RFC1-207ENST00000504554 MT1MQ8N339 61 aa2.84□□□□□ -1.95
RFC1-207ENST00000504554 TNP1P09430 55 aa2.83□□□□□ -1.96
RFC1-207ENST00000504554 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
RFC1-207ENST00000504554 UQCR11O14957 56 aa2.8□□□□□ -1.96
RFC1-207ENST00000504554 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
RFC1-207ENST00000504554 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
RFC1-207ENST00000504554 Q1T7F1 81 aa2.77□□□□□ -1.97
RFC1-207ENST00000504554 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
RFC1-207ENST00000504554 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
RFC1-207ENST00000504554 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
RFC1-207ENST00000504554 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
RFC1-207ENST00000504554 MT4P47944 62 aa2.7□□□□□ -1.98
RFC1-207ENST00000504554 ROMO1P60602 79 aa2.69□□□□□ -1.98
RFC1-207ENST00000504554 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
RFC1-207ENST00000504554 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
RFC1-207ENST00000504554 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
RFC1-207ENST00000504554 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
RFC1-207ENST00000504554 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
RFC1-207ENST00000504554 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
RFC1-207ENST00000504554 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
RFC1-207ENST00000504554 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
RFC1-207ENST00000504554 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
RFC1-207ENST00000504554 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
RFC1-207ENST00000504554 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
RFC1-207ENST00000504554 MT1AP04731 61 aa2.41□□□□□ -2.02
RFC1-207ENST00000504554 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
RFC1-207ENST00000504554 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
RFC1-207ENST00000504554 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
RFC1-207ENST00000504554 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
RFC1-207ENST00000504554 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
RFC1-207ENST00000504554 INE1O15225 51 aa2.2□□□□□ -2.06
RFC1-207ENST00000504554 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
RFC1-207ENST00000504554 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
RFC1-207ENST00000504554 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
RFC1-207ENST00000504554 PRM1P04553 51 aa1.31□□□□□ -2.2
RFC1-207ENST00000504554 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
RFC1-207ENST00000504554 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 60.7 ms