RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 SPRR2GQ9BYE4 73 aa2.73□□□□□ -1.97
NPHP3-AS1-202ENST00000504440 USH2AO75445 5202 aa2.71□□□□□ -1.98
NPHP3-AS1-202ENST00000504440 MT1FP04733 61 aa2.7□□□□□ -1.98
NPHP3-AS1-202ENST00000504440 MT2AP02795 61 aa2.69□□□□□ -1.98
NPHP3-AS1-202ENST00000504440 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
NPHP3-AS1-202ENST00000504440 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
NPHP3-AS1-202ENST00000504440 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
NPHP3-AS1-202ENST00000504440 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
NPHP3-AS1-202ENST00000504440 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
NPHP3-AS1-202ENST00000504440 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
NPHP3-AS1-202ENST00000504440 MT1BP07438 61 aa2.61□□□□□ -1.99
NPHP3-AS1-202ENST00000504440 MT1XP80297 61 aa2.6□□□□□ -1.99
NPHP3-AS1-202ENST00000504440 KRTAP19-8Q3LI54 63 aa2.59□□□□□ -1.99
NPHP3-AS1-202ENST00000504440 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
NPHP3-AS1-202ENST00000504440 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
NPHP3-AS1-202ENST00000504440 CRCT1Q9UGL9 99 aa2.56□□□□□ -2
NPHP3-AS1-202ENST00000504440 KMT2DO14686 5537 aa2.53□□□□□ -2
NPHP3-AS1-202ENST00000504440 KRTAP12-3P60328 96 aa2.53□□□□□ -2
NPHP3-AS1-202ENST00000504440 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
NPHP3-AS1-202ENST00000504440 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.01
NPHP3-AS1-202ENST00000504440 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
NPHP3-AS1-202ENST00000504440 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
NPHP3-AS1-202ENST00000504440 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
NPHP3-AS1-202ENST00000504440 KRTAP19-6Q3LI70 58 aa2.44□□□□□ -2.02
NPHP3-AS1-202ENST00000504440 MUC12Q9UKN1 5478 aa2.34□□□□□ -2.03
NPHP3-AS1-202ENST00000504440 INE1O15225 51 aa2.33□□□□□ -2.04
NPHP3-AS1-202ENST00000504440 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
NPHP3-AS1-202ENST00000504440 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
NPHP3-AS1-202ENST00000504440 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
NPHP3-AS1-202ENST00000504440 NEBP20929 6669 aa2.25□□□□□ -2.05
NPHP3-AS1-202ENST00000504440 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
NPHP3-AS1-202ENST00000504440 MT1LQ93083 61 aa2.24□□□□□ -2.05
NPHP3-AS1-202ENST00000504440 MT1EP04732 61 aa2.23□□□□□ -2.05
NPHP3-AS1-202ENST00000504440 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
NPHP3-AS1-202ENST00000504440 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
NPHP3-AS1-202ENST00000504440 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
NPHP3-AS1-202ENST00000504440 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
NPHP3-AS1-202ENST00000504440 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
NPHP3-AS1-202ENST00000504440 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
NPHP3-AS1-202ENST00000504440 MT1GP13640 62 aa2.15□□□□□ -2.07
NPHP3-AS1-202ENST00000504440 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
NPHP3-AS1-202ENST00000504440 SPRR2FQ96RM1 72 aa2.13□□□□□ -2.07
NPHP3-AS1-202ENST00000504440 MT1MQ8N339 61 aa2.09□□□□□ -2.08
NPHP3-AS1-202ENST00000504440 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
NPHP3-AS1-202ENST00000504440 SPRR2EP22531 72 aa2.07□□□□□ -2.08
NPHP3-AS1-202ENST00000504440 SPRR2BP35325 72 aa2.07□□□□□ -2.08
NPHP3-AS1-202ENST00000504440 SPRR2AP35326 72 aa2.07□□□□□ -2.08
NPHP3-AS1-202ENST00000504440 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
NPHP3-AS1-202ENST00000504440 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
NPHP3-AS1-202ENST00000504440 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
NPHP3-AS1-202ENST00000504440 KRTAP12-4P60329 112 aa2.01□□□□□ -2.09
NPHP3-AS1-202ENST00000504440 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
NPHP3-AS1-202ENST00000504440 SYNE1Q8NF91 8797 aaKnown RBP1.99□□□□□ -2.09
NPHP3-AS1-202ENST00000504440 SPRR2DP22532 72 aa1.99□□□□□ -2.09
NPHP3-AS1-202ENST00000504440 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
NPHP3-AS1-202ENST00000504440 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
NPHP3-AS1-202ENST00000504440 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
NPHP3-AS1-202ENST00000504440 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
NPHP3-AS1-202ENST00000504440 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
NPHP3-AS1-202ENST00000504440 KRTAP5-4Q6L8H1 288 aa1.89□□□□□ -2.11
NPHP3-AS1-202ENST00000504440 MT1AP04731 61 aa1.85□□□□□ -2.11
NPHP3-AS1-202ENST00000504440 PRM1P04553 51 aa1.79□□□□□ -2.12
NPHP3-AS1-202ENST00000504440 MT4P47944 62 aa1.76□□□□□ -2.13
NPHP3-AS1-202ENST00000504440 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
NPHP3-AS1-202ENST00000504440 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
NPHP3-AS1-202ENST00000504440 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
NPHP3-AS1-202ENST00000504440 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
NPHP3-AS1-202ENST00000504440 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
NPHP3-AS1-202ENST00000504440 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
NPHP3-AS1-202ENST00000504440 KRTAP5-8O75690 187 aa1.59□□□□□ -2.15
NPHP3-AS1-202ENST00000504440 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
NPHP3-AS1-202ENST00000504440 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
NPHP3-AS1-202ENST00000504440 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
NPHP3-AS1-202ENST00000504440 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
NPHP3-AS1-202ENST00000504440 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
NPHP3-AS1-202ENST00000504440 PHGR1C9JFL3 82 aa1□□□□□ -2.25
NPHP3-AS1-202ENST00000504440 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 64.3 ms