RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 MT1EP04732 61 aa6.65□□□□□ -1.34
NFKB1-204ENST00000504044 LCE5AQ5TCM9 118 aa6.62□□□□□ -1.35
NFKB1-204ENST00000504044 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
NFKB1-204ENST00000504044 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
NFKB1-204ENST00000504044 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
NFKB1-204ENST00000504044 V9GYY9 64 aa6.55□□□□□ -1.36
NFKB1-204ENST00000504044 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
NFKB1-204ENST00000504044 K7ERS5 55 aa6.51□□□□□ -1.37
NFKB1-204ENST00000504044 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
NFKB1-204ENST00000504044 MT1GP13640 62 aa6.5□□□□□ -1.37
NFKB1-204ENST00000504044 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
NFKB1-204ENST00000504044 H3BS24 57 aa6.43□□□□□ -1.38
NFKB1-204ENST00000504044 Q1T7F1 81 aa6.39□□□□□ -1.39
NFKB1-204ENST00000504044 PSPHP1O15172 72 aa6.38□□□□□ -1.39
NFKB1-204ENST00000504044 MT1LQ93083 61 aa6.37□□□□□ -1.39
NFKB1-204ENST00000504044 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
NFKB1-204ENST00000504044 MT1MQ8N339 61 aa6.33□□□□□ -1.4
NFKB1-204ENST00000504044 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
NFKB1-204ENST00000504044 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
NFKB1-204ENST00000504044 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
NFKB1-204ENST00000504044 A6NED7 52 aa6.24□□□□□ -1.41
NFKB1-204ENST00000504044 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
NFKB1-204ENST00000504044 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
NFKB1-204ENST00000504044 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
NFKB1-204ENST00000504044 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
NFKB1-204ENST00000504044 PCP4P48539 62 aa6.08□□□□□ -1.44
NFKB1-204ENST00000504044 MT4P47944 62 aa6.01□□□□□ -1.45
NFKB1-204ENST00000504044 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
NFKB1-204ENST00000504044 ROMO1P60602 79 aa5.95□□□□□ -1.46
NFKB1-204ENST00000504044 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
NFKB1-204ENST00000504044 GPR98Q8WXG9 6306 aa5.88□□□□□ -1.47
NFKB1-204ENST00000504044 HMCN1Q96RW7 5635 aa5.85□□□□□ -1.47
NFKB1-204ENST00000504044 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
NFKB1-204ENST00000504044 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
NFKB1-204ENST00000504044 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
NFKB1-204ENST00000504044 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
NFKB1-204ENST00000504044 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
NFKB1-204ENST00000504044 AHNAK2Q8IVF2 5795 aa5.59□□□□□ -1.51
NFKB1-204ENST00000504044 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
NFKB1-204ENST00000504044 MT1AP04731 61 aa5.46□□□□□ -1.54
NFKB1-204ENST00000504044 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
NFKB1-204ENST00000504044 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
NFKB1-204ENST00000504044 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
NFKB1-204ENST00000504044 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
NFKB1-204ENST00000504044 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
NFKB1-204ENST00000504044 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
NFKB1-204ENST00000504044 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
NFKB1-204ENST00000504044 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
NFKB1-204ENST00000504044 MT3P25713 68 aa5.04□□□□□ -1.6
NFKB1-204ENST00000504044 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
NFKB1-204ENST00000504044 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
NFKB1-204ENST00000504044 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
NFKB1-204ENST00000504044 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
NFKB1-204ENST00000504044 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
NFKB1-204ENST00000504044 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
NFKB1-204ENST00000504044 MUC5BQ9HC84 5762 aaPredicted RBP4.59□□□□□ -1.67
NFKB1-204ENST00000504044 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
NFKB1-204ENST00000504044 MUC5ACP98088 5654 aa4.58□□□□□ -1.68
NFKB1-204ENST00000504044 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
NFKB1-204ENST00000504044 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
NFKB1-204ENST00000504044 KRTAP5-11Q6L8G4 156 aa4.55□□□□□ -1.68
NFKB1-204ENST00000504044 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
NFKB1-204ENST00000504044 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
NFKB1-204ENST00000504044 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
NFKB1-204ENST00000504044 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
NFKB1-204ENST00000504044 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
NFKB1-204ENST00000504044 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
NFKB1-204ENST00000504044 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
NFKB1-204ENST00000504044 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
NFKB1-204ENST00000504044 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
NFKB1-204ENST00000504044 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
NFKB1-204ENST00000504044 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
NFKB1-204ENST00000504044 PRM1P04553 51 aa3□□□□□ -1.93
NFKB1-204ENST00000504044 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
NFKB1-204ENST00000504044 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
NFKB1-204ENST00000504044 INE1O15225 51 aa2.77□□□□□ -1.97
NFKB1-204ENST00000504044 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
NFKB1-204ENST00000504044 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 88.4 ms