RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
ARHGEF28-206ENST00000504003 CAMK2N1Q7Z7J9 78 aa3.99□□□□□ -1.77
ARHGEF28-206ENST00000504003 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
ARHGEF28-206ENST00000504003 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
ARHGEF28-206ENST00000504003 USH2AO75445 5202 aa3.97□□□□□ -1.77
ARHGEF28-206ENST00000504003 MT1BP07438 61 aa3.95□□□□□ -1.78
ARHGEF28-206ENST00000504003 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
ARHGEF28-206ENST00000504003 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
ARHGEF28-206ENST00000504003 KRTAP10-12P60413 245 aa3.94□□□□□ -1.78
ARHGEF28-206ENST00000504003 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
ARHGEF28-206ENST00000504003 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
ARHGEF28-206ENST00000504003 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
ARHGEF28-206ENST00000504003 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
ARHGEF28-206ENST00000504003 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
ARHGEF28-206ENST00000504003 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
ARHGEF28-206ENST00000504003 MT1XP80297 61 aa3.8□□□□□ -1.8
ARHGEF28-206ENST00000504003 TNP1P09430 55 aa3.76□□□□□ -1.81
ARHGEF28-206ENST00000504003 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
ARHGEF28-206ENST00000504003 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
ARHGEF28-206ENST00000504003 NEBP20929 6669 aa3.72□□□□□ -1.81
ARHGEF28-206ENST00000504003 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
ARHGEF28-206ENST00000504003 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
ARHGEF28-206ENST00000504003 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
ARHGEF28-206ENST00000504003 MUC12Q9UKN1 5478 aa3.63□□□□□ -1.83
ARHGEF28-206ENST00000504003 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
ARHGEF28-206ENST00000504003 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
ARHGEF28-206ENST00000504003 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
ARHGEF28-206ENST00000504003 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
ARHGEF28-206ENST00000504003 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
ARHGEF28-206ENST00000504003 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
ARHGEF28-206ENST00000504003 KMT2DO14686 5537 aa3.49□□□□□ -1.85
ARHGEF28-206ENST00000504003 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
ARHGEF28-206ENST00000504003 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
ARHGEF28-206ENST00000504003 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
ARHGEF28-206ENST00000504003 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
ARHGEF28-206ENST00000504003 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
ARHGEF28-206ENST00000504003 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
ARHGEF28-206ENST00000504003 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
ARHGEF28-206ENST00000504003 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
ARHGEF28-206ENST00000504003 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
ARHGEF28-206ENST00000504003 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
ARHGEF28-206ENST00000504003 MT1EP04732 61 aa3.35□□□□□ -1.87
ARHGEF28-206ENST00000504003 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
ARHGEF28-206ENST00000504003 SPRR2EP22531 72 aa3.33□□□□□ -1.88
ARHGEF28-206ENST00000504003 SPRR2BP35325 72 aa3.33□□□□□ -1.88
ARHGEF28-206ENST00000504003 SPRR2AP35326 72 aa3.33□□□□□ -1.88
ARHGEF28-206ENST00000504003 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
ARHGEF28-206ENST00000504003 MT1GP13640 62 aa3.28□□□□□ -1.88
ARHGEF28-206ENST00000504003 MT1LQ93083 61 aa3.27□□□□□ -1.89
ARHGEF28-206ENST00000504003 SPRR2DP22532 72 aa3.22□□□□□ -1.89
ARHGEF28-206ENST00000504003 MT1MQ8N339 61 aa3.17□□□□□ -1.9
ARHGEF28-206ENST00000504003 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
ARHGEF28-206ENST00000504003 INE1O15225 51 aa3.13□□□□□ -1.91
ARHGEF28-206ENST00000504003 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
ARHGEF28-206ENST00000504003 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
ARHGEF28-206ENST00000504003 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
ARHGEF28-206ENST00000504003 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
ARHGEF28-206ENST00000504003 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
ARHGEF28-206ENST00000504003 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
ARHGEF28-206ENST00000504003 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
ARHGEF28-206ENST00000504003 MT4P47944 62 aa2.87□□□□□ -1.95
ARHGEF28-206ENST00000504003 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
ARHGEF28-206ENST00000504003 MT1AP04731 61 aa2.81□□□□□ -1.96
ARHGEF28-206ENST00000504003 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
ARHGEF28-206ENST00000504003 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
ARHGEF28-206ENST00000504003 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.98
ARHGEF28-206ENST00000504003 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
ARHGEF28-206ENST00000504003 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
ARHGEF28-206ENST00000504003 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
ARHGEF28-206ENST00000504003 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
ARHGEF28-206ENST00000504003 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
ARHGEF28-206ENST00000504003 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
ARHGEF28-206ENST00000504003 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
ARHGEF28-206ENST00000504003 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
ARHGEF28-206ENST00000504003 PRM1P04553 51 aa2.09□□□□□ -2.07
ARHGEF28-206ENST00000504003 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
ARHGEF28-206ENST00000504003 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
ARHGEF28-206ENST00000504003 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 63.4 ms