RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 K7ERS5 55 aa8.04□□□□□ -1.12
LSM6-203ENST00000503982 TNP1P09430 55 aa8.01□□□□□ -1.13
LSM6-203ENST00000503982 KRTAP4-9Q9BYQ8 210 aa8□□□□□ -1.13
LSM6-203ENST00000503982 MT1GP13640 62 aa7.97□□□□□ -1.13
LSM6-203ENST00000503982 PP632Q6XCG6 107 aa7.97□□□□□ -1.13
LSM6-203ENST00000503982 GPR98Q8WXG9 6306 aa7.92□□□□□ -1.14
LSM6-203ENST00000503982 CDC42SE1Q9NRR8 79 aa7.88□□□□□ -1.15
LSM6-203ENST00000503982 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
LSM6-203ENST00000503982 LCE3AQ5TA76 89 aa7.83□□□□□ -1.16
LSM6-203ENST00000503982 MT1MQ8N339 61 aa7.83□□□□□ -1.16
LSM6-203ENST00000503982 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
LSM6-203ENST00000503982 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
LSM6-203ENST00000503982 MT1LQ93083 61 aa7.82□□□□□ -1.16
LSM6-203ENST00000503982 LCE1DQ5T752 114 aa7.76□□□□□ -1.17
LSM6-203ENST00000503982 MT4P47944 62 aa7.73□□□□□ -1.17
LSM6-203ENST00000503982 LCE4AQ5TA78 99 aa7.72□□□□□ -1.17
LSM6-203ENST00000503982 KRTAP4-3Q9BYR4 195 aa7.67□□□□□ -1.18
LSM6-203ENST00000503982 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
LSM6-203ENST00000503982 HMCN1Q96RW7 5635 aa7.6□□□□□ -1.19
LSM6-203ENST00000503982 ROMO1P60602 79 aa7.59□□□□□ -1.19
LSM6-203ENST00000503982 KRTAP12-3P60328 96 aa7.53□□□□□ -1.2
LSM6-203ENST00000503982 KRTAP5-4Q6L8H1 288 aa7.47□□□□□ -1.21
LSM6-203ENST00000503982 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.22
LSM6-203ENST00000503982 AHNAK2Q8IVF2 5795 aa7.42□□□□□ -1.22
LSM6-203ENST00000503982 BRK1Q8WUW1 75 aa7.38□□□□□ -1.23
LSM6-203ENST00000503982 KRTAP19-4Q3LI73 84 aa7.32□□□□□ -1.24
LSM6-203ENST00000503982 KRTAP5-10Q6L8G5 202 aa7.22□□□□□ -1.25
LSM6-203ENST00000503982 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
LSM6-203ENST00000503982 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
LSM6-203ENST00000503982 KRTAP5-5Q701N2 237 aaPredicted RBP7.11□□□□□ -1.27
LSM6-203ENST00000503982 KRTAP12-4P60329 112 aa7.09□□□□□ -1.27
LSM6-203ENST00000503982 KRTAP5-3Q6L8H2 238 aa7.06□□□□□ -1.28
LSM6-203ENST00000503982 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
LSM6-203ENST00000503982 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
LSM6-203ENST00000503982 PMAIP1Q13794 54 aa6.97□□□□□ -1.29
LSM6-203ENST00000503982 KRTAP5-7Q6L8G8 165 aa6.96□□□□□ -1.3
LSM6-203ENST00000503982 SYNE1Q8NF91 8797 aaKnown RBP6.95□□□□□ -1.3
LSM6-203ENST00000503982 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
LSM6-203ENST00000503982 PRO0628Q9UI54 55 aa6.9□□□□□ -1.3
LSM6-203ENST00000503982 KRTAP9-9Q9BYP9 154 aa6.68□□□□□ -1.34
LSM6-203ENST00000503982 KRTAP9-4Q9BYQ2 154 aa6.68□□□□□ -1.34
LSM6-203ENST00000503982 MT1AP04731 61 aa6.66□□□□□ -1.34
LSM6-203ENST00000503982 KRTAP6-1Q3LI64 71 aa6.63□□□□□ -1.35
LSM6-203ENST00000503982 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
LSM6-203ENST00000503982 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
LSM6-203ENST00000503982 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
LSM6-203ENST00000503982 KRTAP5-2Q701N4 177 aa6.51□□□□□ -1.37
LSM6-203ENST00000503982 KTN1-AS1Q86SY8 53 aa6.49□□□□□ -1.37
LSM6-203ENST00000503982 H3BS24 57 aa6.38□□□□□ -1.39
LSM6-203ENST00000503982 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
LSM6-203ENST00000503982 OBSCNQ5VST9 7968 aa6.29□□□□□ -1.4
LSM6-203ENST00000503982 KRTAP5-8O75690 187 aa6.28□□□□□ -1.4
LSM6-203ENST00000503982 MT3P25713 68 aa6.13□□□□□ -1.43
LSM6-203ENST00000503982 AHNAKQ09666 5890 aaKnown RBP6.13□□□□□ -1.43
LSM6-203ENST00000503982 MUC5BQ9HC84 5762 aaPredicted RBP6.09□□□□□ -1.43
LSM6-203ENST00000503982 KRTAP4-2Q9BYR5 136 aa6.08□□□□□ -1.44
LSM6-203ENST00000503982 MUC5ACP98088 5654 aa6.07□□□□□ -1.44
LSM6-203ENST00000503982 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
LSM6-203ENST00000503982 KRTAP5-1Q6L8H4 278 aa5.88□□□□□ -1.47
LSM6-203ENST00000503982 LCE1EQ5T753 118 aa5.58□□□□□ -1.52
LSM6-203ENST00000503982 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
LSM6-203ENST00000503982 LCE1BQ5T7P3 118 aa5.41□□□□□ -1.54
LSM6-203ENST00000503982 LCE1CQ5T751 118 aa5.18□□□□□ -1.58
LSM6-203ENST00000503982 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
LSM6-203ENST00000503982 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
LSM6-203ENST00000503982 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
LSM6-203ENST00000503982 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
LSM6-203ENST00000503982 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
LSM6-203ENST00000503982 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
LSM6-203ENST00000503982 KRTAP21-2Q3LI59 83 aa4.32□□□□□ -1.72
LSM6-203ENST00000503982 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
LSM6-203ENST00000503982 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
LSM6-203ENST00000503982 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
LSM6-203ENST00000503982 INE1O15225 51 aa4.04□□□□□ -1.76
LSM6-203ENST00000503982 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
LSM6-203ENST00000503982 PRM1P04553 51 aa3.86□□□□□ -1.79
LSM6-203ENST00000503982 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
LSM6-203ENST00000503982 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 159.2 ms