RNA–Protein interactions for RNA: ENST00000503646.1

TNFAIP8-204, Transcript of TNF alpha induced protein 8, humanhuman

TSL 2 BASIC

Gene TNFAIP8, Length 2,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-204ENST00000503646 KRTAP10-5P60370 271 aa3□□□□□ -1.93
TNFAIP8-204ENST00000503646 MT1XP80297 61 aa2.98□□□□□ -1.93
TNFAIP8-204ENST00000503646 KRTAP19-8Q3LI54 63 aa2.97□□□□□ -1.93
TNFAIP8-204ENST00000503646 MT1BP07438 61 aa2.96□□□□□ -1.93
TNFAIP8-204ENST00000503646 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
TNFAIP8-204ENST00000503646 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
TNFAIP8-204ENST00000503646 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
TNFAIP8-204ENST00000503646 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
TNFAIP8-204ENST00000503646 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
TNFAIP8-204ENST00000503646 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
TNFAIP8-204ENST00000503646 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
TNFAIP8-204ENST00000503646 KMT2DO14686 5537 aa2.83□□□□□ -1.96
TNFAIP8-204ENST00000503646 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
TNFAIP8-204ENST00000503646 USH2AO75445 5202 aa2.7□□□□□ -1.98
TNFAIP8-204ENST00000503646 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
TNFAIP8-204ENST00000503646 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
TNFAIP8-204ENST00000503646 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
TNFAIP8-204ENST00000503646 KRTAP19-6Q3LI70 58 aa2.64□□□□□ -1.99
TNFAIP8-204ENST00000503646 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
TNFAIP8-204ENST00000503646 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
TNFAIP8-204ENST00000503646 MT1LQ93083 61 aa2.6□□□□□ -1.99
TNFAIP8-204ENST00000503646 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
TNFAIP8-204ENST00000503646 MT1EP04732 61 aa2.56□□□□□ -2
TNFAIP8-204ENST00000503646 LCE1EQ5T753 118 aa2.56□□□□□ -2
TNFAIP8-204ENST00000503646 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
TNFAIP8-204ENST00000503646 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
TNFAIP8-204ENST00000503646 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
TNFAIP8-204ENST00000503646 MT1GP13640 62 aa2.49□□□□□ -2.01
TNFAIP8-204ENST00000503646 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
TNFAIP8-204ENST00000503646 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
TNFAIP8-204ENST00000503646 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
TNFAIP8-204ENST00000503646 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
TNFAIP8-204ENST00000503646 PRM1P04553 51 aa2.42□□□□□ -2.02
TNFAIP8-204ENST00000503646 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
TNFAIP8-204ENST00000503646 MT3P25713 68 aa2.4□□□□□ -2.03
TNFAIP8-204ENST00000503646 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
TNFAIP8-204ENST00000503646 MT1MQ8N339 61 aa2.38□□□□□ -2.03
TNFAIP8-204ENST00000503646 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
TNFAIP8-204ENST00000503646 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
TNFAIP8-204ENST00000503646 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
TNFAIP8-204ENST00000503646 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
TNFAIP8-204ENST00000503646 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
TNFAIP8-204ENST00000503646 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
TNFAIP8-204ENST00000503646 SPRR2FQ96RM1 72 aa2.32□□□□□ -2.04
TNFAIP8-204ENST00000503646 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
TNFAIP8-204ENST00000503646 MT1AP04731 61 aa2.31□□□□□ -2.04
TNFAIP8-204ENST00000503646 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
TNFAIP8-204ENST00000503646 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
TNFAIP8-204ENST00000503646 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
TNFAIP8-204ENST00000503646 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
TNFAIP8-204ENST00000503646 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
TNFAIP8-204ENST00000503646 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
TNFAIP8-204ENST00000503646 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
TNFAIP8-204ENST00000503646 SPRR2EP22531 72 aa2.19□□□□□ -2.06
TNFAIP8-204ENST00000503646 SPRR2BP35325 72 aa2.19□□□□□ -2.06
TNFAIP8-204ENST00000503646 SPRR2AP35326 72 aa2.19□□□□□ -2.06
TNFAIP8-204ENST00000503646 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
TNFAIP8-204ENST00000503646 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
TNFAIP8-204ENST00000503646 NEBP20929 6669 aa2.11□□□□□ -2.07
TNFAIP8-204ENST00000503646 SPRR2DP22532 72 aa2.1□□□□□ -2.07
TNFAIP8-204ENST00000503646 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
TNFAIP8-204ENST00000503646 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
TNFAIP8-204ENST00000503646 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
TNFAIP8-204ENST00000503646 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
TNFAIP8-204ENST00000503646 MT4P47944 62 aa1.82□□□□□ -2.12
TNFAIP8-204ENST00000503646 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
TNFAIP8-204ENST00000503646 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
TNFAIP8-204ENST00000503646 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
TNFAIP8-204ENST00000503646 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
TNFAIP8-204ENST00000503646 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
TNFAIP8-204ENST00000503646 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
TNFAIP8-204ENST00000503646 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
TNFAIP8-204ENST00000503646 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
TNFAIP8-204ENST00000503646 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
TNFAIP8-204ENST00000503646 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
TNFAIP8-204ENST00000503646 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
TNFAIP8-204ENST00000503646 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 29.3 ms