RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
CLDND1-209ENST00000503621 MT1GP13640 62 aa6.27□□□□□ -1.41
CLDND1-209ENST00000503621 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
CLDND1-209ENST00000503621 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
CLDND1-209ENST00000503621 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
CLDND1-209ENST00000503621 A6NED7 52 aa6.22□□□□□ -1.41
CLDND1-209ENST00000503621 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
CLDND1-209ENST00000503621 KRTAP23-1A1A580 65 aa6.18□□□□□ -1.42
CLDND1-209ENST00000503621 MT1LQ93083 61 aa6.17□□□□□ -1.42
CLDND1-209ENST00000503621 KRTAP4-12Q9BQ66 201 aa6.13□□□□□ -1.43
CLDND1-209ENST00000503621 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
CLDND1-209ENST00000503621 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
CLDND1-209ENST00000503621 MT1MQ8N339 61 aa6.08□□□□□ -1.44
CLDND1-209ENST00000503621 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
CLDND1-209ENST00000503621 DSTQ03001 7570 aaKnown RBP6.05□□□□□ -1.44
CLDND1-209ENST00000503621 ROMO1P60602 79 aa5.94□□□□□ -1.46
CLDND1-209ENST00000503621 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
CLDND1-209ENST00000503621 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
CLDND1-209ENST00000503621 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
CLDND1-209ENST00000503621 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
CLDND1-209ENST00000503621 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
CLDND1-209ENST00000503621 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
CLDND1-209ENST00000503621 H3BS24 57 aa5.74□□□□□ -1.49
CLDND1-209ENST00000503621 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
CLDND1-209ENST00000503621 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
CLDND1-209ENST00000503621 LCE1DQ5T752 114 aa5.65□□□□□ -1.5
CLDND1-209ENST00000503621 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
CLDND1-209ENST00000503621 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
CLDND1-209ENST00000503621 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
CLDND1-209ENST00000503621 MT4P47944 62 aa5.52□□□□□ -1.53
CLDND1-209ENST00000503621 HMCN1Q96RW7 5635 aa5.5□□□□□ -1.53
CLDND1-209ENST00000503621 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
CLDND1-209ENST00000503621 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
CLDND1-209ENST00000503621 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
CLDND1-209ENST00000503621 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
CLDND1-209ENST00000503621 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
CLDND1-209ENST00000503621 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
CLDND1-209ENST00000503621 MT1AP04731 61 aa5.28□□□□□ -1.56
CLDND1-209ENST00000503621 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
CLDND1-209ENST00000503621 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
CLDND1-209ENST00000503621 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
CLDND1-209ENST00000503621 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
CLDND1-209ENST00000503621 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
CLDND1-209ENST00000503621 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
CLDND1-209ENST00000503621 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
CLDND1-209ENST00000503621 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.59
CLDND1-209ENST00000503621 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
CLDND1-209ENST00000503621 PRO0628Q9UI54 55 aa5.11□□□□□ -1.59
CLDND1-209ENST00000503621 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
CLDND1-209ENST00000503621 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
CLDND1-209ENST00000503621 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
CLDND1-209ENST00000503621 MT3P25713 68 aa4.83□□□□□ -1.64
CLDND1-209ENST00000503621 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
CLDND1-209ENST00000503621 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
CLDND1-209ENST00000503621 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
CLDND1-209ENST00000503621 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
CLDND1-209ENST00000503621 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
CLDND1-209ENST00000503621 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
CLDND1-209ENST00000503621 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
CLDND1-209ENST00000503621 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
CLDND1-209ENST00000503621 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
CLDND1-209ENST00000503621 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
CLDND1-209ENST00000503621 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
CLDND1-209ENST00000503621 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
CLDND1-209ENST00000503621 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
CLDND1-209ENST00000503621 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
CLDND1-209ENST00000503621 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
CLDND1-209ENST00000503621 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
CLDND1-209ENST00000503621 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
CLDND1-209ENST00000503621 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
CLDND1-209ENST00000503621 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
CLDND1-209ENST00000503621 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
CLDND1-209ENST00000503621 INE1O15225 51 aa3□□□□□ -1.93
CLDND1-209ENST00000503621 PRM1P04553 51 aa2.98□□□□□ -1.93
CLDND1-209ENST00000503621 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
CLDND1-209ENST00000503621 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
CLDND1-209ENST00000503621 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CLDND1-209ENST00000503621 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 145.7 ms