RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
CDC42SE2-206ENST00000503291 KTN1-AS1Q86SY8 53 aa7.3□□□□□ -1.24
CDC42SE2-206ENST00000503291 NEBP20929 6669 aa7.3□□□□□ -1.24
CDC42SE2-206ENST00000503291 KRTAP19-3Q7Z4W3 81 aa7.3□□□□□ -1.24
CDC42SE2-206ENST00000503291 MT1LQ93083 61 aa7.28□□□□□ -1.24
CDC42SE2-206ENST00000503291 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
CDC42SE2-206ENST00000503291 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
CDC42SE2-206ENST00000503291 MT1GP13640 62 aa7.2□□□□□ -1.26
CDC42SE2-206ENST00000503291 SPRR2DP22532 72 aa7.11□□□□□ -1.27
CDC42SE2-206ENST00000503291 MT1MQ8N339 61 aa7.09□□□□□ -1.27
CDC42SE2-206ENST00000503291 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
CDC42SE2-206ENST00000503291 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
CDC42SE2-206ENST00000503291 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.3
CDC42SE2-206ENST00000503291 KRTAP4-3Q9BYR4 195 aa6.94□□□□□ -1.3
CDC42SE2-206ENST00000503291 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
CDC42SE2-206ENST00000503291 SVIPQ8NHG7 77 aa6.93□□□□□ -1.3
CDC42SE2-206ENST00000503291 KRTAP2-3P0C7H8 128 aa6.89□□□□□ -1.31
CDC42SE2-206ENST00000503291 KRTAP2-4Q9BYR9 128 aa6.89□□□□□ -1.31
CDC42SE2-206ENST00000503291 KRTAP20-1Q3LI63 56 aa6.88□□□□□ -1.31
CDC42SE2-206ENST00000503291 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
CDC42SE2-206ENST00000503291 KRTAP2-2Q9BYT5 123 aa6.72□□□□□ -1.33
CDC42SE2-206ENST00000503291 KRTAP2-1Q9BYU5 128 aa6.72□□□□□ -1.33
CDC42SE2-206ENST00000503291 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
CDC42SE2-206ENST00000503291 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
CDC42SE2-206ENST00000503291 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
CDC42SE2-206ENST00000503291 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
CDC42SE2-206ENST00000503291 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
CDC42SE2-206ENST00000503291 KRTAP5-4Q6L8H1 288 aa6.35□□□□□ -1.39
CDC42SE2-206ENST00000503291 H3BS24 57 aa6.33□□□□□ -1.4
CDC42SE2-206ENST00000503291 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
CDC42SE2-206ENST00000503291 KRTAP4-9Q9BYQ8 210 aa6.25□□□□□ -1.41
CDC42SE2-206ENST00000503291 MT4P47944 62 aa6.2□□□□□ -1.42
CDC42SE2-206ENST00000503291 MT1AP04731 61 aa6.19□□□□□ -1.42
CDC42SE2-206ENST00000503291 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
CDC42SE2-206ENST00000503291 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.43
CDC42SE2-206ENST00000503291 SYNE1Q8NF91 8797 aaKnown RBP6.1□□□□□ -1.43
CDC42SE2-206ENST00000503291 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
CDC42SE2-206ENST00000503291 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
CDC42SE2-206ENST00000503291 HMCN1Q96RW7 5635 aa6.04□□□□□ -1.44
CDC42SE2-206ENST00000503291 KRTAP20-2Q3LI61 65 aa5.95□□□□□ -1.46
CDC42SE2-206ENST00000503291 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
CDC42SE2-206ENST00000503291 KRTAP4-12Q9BQ66 201 aa5.92□□□□□ -1.46
CDC42SE2-206ENST00000503291 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
CDC42SE2-206ENST00000503291 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
CDC42SE2-206ENST00000503291 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
CDC42SE2-206ENST00000503291 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
CDC42SE2-206ENST00000503291 MT3P25713 68 aa5.64□□□□□ -1.51
CDC42SE2-206ENST00000503291 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
CDC42SE2-206ENST00000503291 GPR98Q8WXG9 6306 aa5.51□□□□□ -1.53
CDC42SE2-206ENST00000503291 AHNAK2Q8IVF2 5795 aa5.51□□□□□ -1.53
CDC42SE2-206ENST00000503291 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
CDC42SE2-206ENST00000503291 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
CDC42SE2-206ENST00000503291 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
CDC42SE2-206ENST00000503291 A0A0A0MQY5 61 aa5.26□□□□□ -1.57
CDC42SE2-206ENST00000503291 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
CDC42SE2-206ENST00000503291 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
CDC42SE2-206ENST00000503291 KRTAP5-8O75690 187 aa5.07□□□□□ -1.6
CDC42SE2-206ENST00000503291 KRTAP5-7Q6L8G8 165 aa5.03□□□□□ -1.6
CDC42SE2-206ENST00000503291 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
CDC42SE2-206ENST00000503291 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
CDC42SE2-206ENST00000503291 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
CDC42SE2-206ENST00000503291 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
CDC42SE2-206ENST00000503291 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
CDC42SE2-206ENST00000503291 LCE1CQ5T751 118 aa4.65□□□□□ -1.66
CDC42SE2-206ENST00000503291 INE1O15225 51 aa4.58□□□□□ -1.68
CDC42SE2-206ENST00000503291 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
CDC42SE2-206ENST00000503291 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
CDC42SE2-206ENST00000503291 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-206ENST00000503291 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
CDC42SE2-206ENST00000503291 PRM1P04553 51 aa4.13□□□□□ -1.75
CDC42SE2-206ENST00000503291 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
CDC42SE2-206ENST00000503291 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
CDC42SE2-206ENST00000503291 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
CDC42SE2-206ENST00000503291 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
CDC42SE2-206ENST00000503291 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
CDC42SE2-206ENST00000503291 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
CDC42SE2-206ENST00000503291 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms