RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
SNCA-207ENST00000502987 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
SNCA-207ENST00000502987 V9GYY9 64 aa3.97□□□□□ -1.77
SNCA-207ENST00000502987 COA5Q86WW8 74 aa3.96□□□□□ -1.78
SNCA-207ENST00000502987 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
SNCA-207ENST00000502987 SERP2Q8N6R1 65 aa3.95□□□□□ -1.78
SNCA-207ENST00000502987 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
SNCA-207ENST00000502987 CYSTM1Q9H1C7 97 aa3.93□□□□□ -1.78
SNCA-207ENST00000502987 A0A1B0GU33 70 aa3.91□□□□□ -1.78
SNCA-207ENST00000502987 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
SNCA-207ENST00000502987 MT1GP13640 62 aa3.9□□□□□ -1.79
SNCA-207ENST00000502987 TMEM258P61165 79 aa3.9□□□□□ -1.79
SNCA-207ENST00000502987 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
SNCA-207ENST00000502987 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
SNCA-207ENST00000502987 COX7CP15954 63 aa3.86□□□□□ -1.79
SNCA-207ENST00000502987 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
SNCA-207ENST00000502987 MT4P47944 62 aa3.84□□□□□ -1.79
SNCA-207ENST00000502987 SMIM26A0A096LP01 95 aa3.82□□□□□ -1.8
SNCA-207ENST00000502987 MT1MQ8N339 61 aa3.81□□□□□ -1.8
SNCA-207ENST00000502987 A0A1B0GU69 56 aa3.8□□□□□ -1.8
SNCA-207ENST00000502987 MT1LQ93083 61 aa3.79□□□□□ -1.8
SNCA-207ENST00000502987 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
SNCA-207ENST00000502987 A8MU10 97 aa3.77□□□□□ -1.81
SNCA-207ENST00000502987 TNP1P09430 55 aa3.77□□□□□ -1.81
SNCA-207ENST00000502987 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
SNCA-207ENST00000502987 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
SNCA-207ENST00000502987 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
SNCA-207ENST00000502987 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
SNCA-207ENST00000502987 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
SNCA-207ENST00000502987 H7BZZ5 65 aa3.74□□□□□ -1.81
SNCA-207ENST00000502987 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
SNCA-207ENST00000502987 BRK1Q8WUW1 75 aa3.71□□□□□ -1.82
SNCA-207ENST00000502987 ATP5EP56381 51 aaPredicted RBP3.7□□□□□ -1.82
SNCA-207ENST00000502987 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
SNCA-207ENST00000502987 PRR15LQ9BU68 103 aa3.65□□□□□ -1.83
SNCA-207ENST00000502987 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
SNCA-207ENST00000502987 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
SNCA-207ENST00000502987 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
SNCA-207ENST00000502987 Q1T7F1 81 aa3.55□□□□□ -1.84
SNCA-207ENST00000502987 LINC01558Q9Y6Z2 57 aa3.52□□□□□ -1.85
SNCA-207ENST00000502987 UQCR11O14957 56 aa3.51□□□□□ -1.85
SNCA-207ENST00000502987 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
SNCA-207ENST00000502987 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
SNCA-207ENST00000502987 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
SNCA-207ENST00000502987 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
SNCA-207ENST00000502987 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
SNCA-207ENST00000502987 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
SNCA-207ENST00000502987 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
SNCA-207ENST00000502987 K7ERS5 55 aa3.42□□□□□ -1.86
SNCA-207ENST00000502987 MIR22HGQ0VDD5 57 aa3.42□□□□□ -1.86
SNCA-207ENST00000502987 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.86
SNCA-207ENST00000502987 PSPHP1O15172 72 aa3.38□□□□□ -1.87
SNCA-207ENST00000502987 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
SNCA-207ENST00000502987 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
SNCA-207ENST00000502987 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
SNCA-207ENST00000502987 A6NED7 52 aa3.3□□□□□ -1.88
SNCA-207ENST00000502987 MT1AP04731 61 aa3.22□□□□□ -1.89
SNCA-207ENST00000502987 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
SNCA-207ENST00000502987 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
SNCA-207ENST00000502987 ROMO1P60602 79 aa3.13□□□□□ -1.91
SNCA-207ENST00000502987 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
SNCA-207ENST00000502987 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
SNCA-207ENST00000502987 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
SNCA-207ENST00000502987 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
SNCA-207ENST00000502987 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
SNCA-207ENST00000502987 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
SNCA-207ENST00000502987 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
SNCA-207ENST00000502987 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
SNCA-207ENST00000502987 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
SNCA-207ENST00000502987 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
SNCA-207ENST00000502987 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
SNCA-207ENST00000502987 INE1O15225 51 aa2.46□□□□□ -2.02
SNCA-207ENST00000502987 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
SNCA-207ENST00000502987 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
SNCA-207ENST00000502987 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
SNCA-207ENST00000502987 PRM1P04553 51 aa1.59□□□□□ -2.15
SNCA-207ENST00000502987 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 52.4 ms