RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 PSPHP1O15172 72 aa4.13□□□□□ -1.75
UBE2D3-212ENST00000502563 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
UBE2D3-212ENST00000502563 SPRR2EP22531 72 aa4.08□□□□□ -1.76
UBE2D3-212ENST00000502563 SPRR2BP35325 72 aa4.08□□□□□ -1.76
UBE2D3-212ENST00000502563 SPRR2AP35326 72 aa4.08□□□□□ -1.76
UBE2D3-212ENST00000502563 TNP1P09430 55 aa4.06□□□□□ -1.76
UBE2D3-212ENST00000502563 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
UBE2D3-212ENST00000502563 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
UBE2D3-212ENST00000502563 A6NED7 52 aa4.04□□□□□ -1.76
UBE2D3-212ENST00000502563 K7ERS5 55 aa4.04□□□□□ -1.76
UBE2D3-212ENST00000502563 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
UBE2D3-212ENST00000502563 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
UBE2D3-212ENST00000502563 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
UBE2D3-212ENST00000502563 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
UBE2D3-212ENST00000502563 MT1EP04732 61 aa3.99□□□□□ -1.77
UBE2D3-212ENST00000502563 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
UBE2D3-212ENST00000502563 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
UBE2D3-212ENST00000502563 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
UBE2D3-212ENST00000502563 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
UBE2D3-212ENST00000502563 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
UBE2D3-212ENST00000502563 SPRR2DP22532 72 aa3.94□□□□□ -1.78
UBE2D3-212ENST00000502563 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
UBE2D3-212ENST00000502563 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
UBE2D3-212ENST00000502563 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
UBE2D3-212ENST00000502563 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
UBE2D3-212ENST00000502563 MT1GP13640 62 aa3.88□□□□□ -1.79
UBE2D3-212ENST00000502563 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
UBE2D3-212ENST00000502563 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
UBE2D3-212ENST00000502563 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
UBE2D3-212ENST00000502563 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
UBE2D3-212ENST00000502563 MT1LQ93083 61 aa3.84□□□□□ -1.79
UBE2D3-212ENST00000502563 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
UBE2D3-212ENST00000502563 ROMO1P60602 79 aa3.78□□□□□ -1.8
UBE2D3-212ENST00000502563 MT1MQ8N339 61 aa3.78□□□□□ -1.8
UBE2D3-212ENST00000502563 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
UBE2D3-212ENST00000502563 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
UBE2D3-212ENST00000502563 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
UBE2D3-212ENST00000502563 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
UBE2D3-212ENST00000502563 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
UBE2D3-212ENST00000502563 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
UBE2D3-212ENST00000502563 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
UBE2D3-212ENST00000502563 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
UBE2D3-212ENST00000502563 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
UBE2D3-212ENST00000502563 MT3P25713 68 aa3.41□□□□□ -1.86
UBE2D3-212ENST00000502563 MT4P47944 62 aa3.39□□□□□ -1.87
UBE2D3-212ENST00000502563 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
UBE2D3-212ENST00000502563 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
UBE2D3-212ENST00000502563 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
UBE2D3-212ENST00000502563 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
UBE2D3-212ENST00000502563 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
UBE2D3-212ENST00000502563 MT1AP04731 61 aa3.29□□□□□ -1.88
UBE2D3-212ENST00000502563 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.89
UBE2D3-212ENST00000502563 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
UBE2D3-212ENST00000502563 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
UBE2D3-212ENST00000502563 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
UBE2D3-212ENST00000502563 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
UBE2D3-212ENST00000502563 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
UBE2D3-212ENST00000502563 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
UBE2D3-212ENST00000502563 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
UBE2D3-212ENST00000502563 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
UBE2D3-212ENST00000502563 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
UBE2D3-212ENST00000502563 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
UBE2D3-212ENST00000502563 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
UBE2D3-212ENST00000502563 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
UBE2D3-212ENST00000502563 A0A0A0MQY5 61 aa2.65□□□□□ -1.99
UBE2D3-212ENST00000502563 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
UBE2D3-212ENST00000502563 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
UBE2D3-212ENST00000502563 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
UBE2D3-212ENST00000502563 LCE1CQ5T751 118 aa2.57□□□□□ -2
UBE2D3-212ENST00000502563 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
UBE2D3-212ENST00000502563 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
UBE2D3-212ENST00000502563 INE1O15225 51 aa2.47□□□□□ -2.01
UBE2D3-212ENST00000502563 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
UBE2D3-212ENST00000502563 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
UBE2D3-212ENST00000502563 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
UBE2D3-212ENST00000502563 PRM1P04553 51 aa1.9□□□□□ -2.11
UBE2D3-212ENST00000502563 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
UBE2D3-212ENST00000502563 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms