RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 TP53AIP1Q9HCN2 124 aa1.84□□□□□ -2.11
CCSER1-202ENST00000502478 RPS29P62273 56 aaKnown RBP1.83□□□□□ -2.12
CCSER1-202ENST00000502478 COX6B2Q6YFQ2 88 aa1.83□□□□□ -2.12
CCSER1-202ENST00000502478 LINC00472Q9H8W2 130 aa1.82□□□□□ -2.12
CCSER1-202ENST00000502478 MT1HP80294 61 aa1.81□□□□□ -2.12
CCSER1-202ENST00000502478 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
CCSER1-202ENST00000502478 RPL37P61927 97 aaKnown RBP1.79□□□□□ -2.12
CCSER1-202ENST00000502478 KRTAP19-2Q3LHN2 52 aa1.79□□□□□ -2.12
CCSER1-202ENST00000502478 Q96NJ1 140 aa1.78□□□□□ -2.12
CCSER1-202ENST00000502478 MMP24-AS1A0A0U1RRL7 71 aa1.76□□□□□ -2.13
CCSER1-202ENST00000502478 FSIP2Q5CZC0 6907 aa1.73□□□□□ -2.13
CCSER1-202ENST00000502478 A0A1B0GU33 70 aa1.73□□□□□ -2.13
CCSER1-202ENST00000502478 CRIPTQ9P021 101 aa1.73□□□□□ -2.13
CCSER1-202ENST00000502478 MRPL34Q9BQ48 92 aaKnown RBP1.72□□□□□ -2.13
CCSER1-202ENST00000502478 R4GN34 69 aa1.72□□□□□ -2.13
CCSER1-202ENST00000502478 FLGP20930 4061 aaPredicted RBP1.7□□□□□ -2.14
CCSER1-202ENST00000502478 H0YAA0 97 aa1.7□□□□□ -2.14
CCSER1-202ENST00000502478 KRTAP6-3Q3LI67 103 aa1.7□□□□□ -2.14
CCSER1-202ENST00000502478 MT2AP02795 61 aa1.68□□□□□ -2.14
CCSER1-202ENST00000502478 H1FX-AS1Q4G0G2 97 aa1.68□□□□□ -2.14
CCSER1-202ENST00000502478 MT1FP04733 61 aa1.67□□□□□ -2.14
CCSER1-202ENST00000502478 PRO2289Q9P1D8 64 aa1.67□□□□□ -2.14
CCSER1-202ENST00000502478 USH2AO75445 5202 aa1.64□□□□□ -2.15
CCSER1-202ENST00000502478 PLAC4Q8WY50 150 aa1.64□□□□□ -2.15
CCSER1-202ENST00000502478 SSPOA2VEC9 5147 aa1.63□□□□□ -2.15
CCSER1-202ENST00000502478 C10orf95Q9H7T3 257 aa1.62□□□□□ -2.15
CCSER1-202ENST00000502478 INE1O15225 51 aa1.59□□□□□ -2.15
CCSER1-202ENST00000502478 KRTAP19-6Q3LI70 58 aa1.58□□□□□ -2.16
CCSER1-202ENST00000502478 A0A0D9SG42 100 aa1.54□□□□□ -2.16
CCSER1-202ENST00000502478 S4R3F8 94 aa1.54□□□□□ -2.16
CCSER1-202ENST00000502478 MACF1Q9UPN3 7388 aaKnown RBP1.52□□□□□ -2.17
CCSER1-202ENST00000502478 SYNE2Q8WXH0 6885 aaKnown RBP1.51□□□□□ -2.17
CCSER1-202ENST00000502478 MT1BP07438 61 aa1.5□□□□□ -2.17
CCSER1-202ENST00000502478 KRTAP13-4Q3LI77 160 aa1.5□□□□□ -2.17
CCSER1-202ENST00000502478 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
CCSER1-202ENST00000502478 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
CCSER1-202ENST00000502478 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
CCSER1-202ENST00000502478 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.18
CCSER1-202ENST00000502478 M0QZ58 72 aa1.44□□□□□ -2.18
CCSER1-202ENST00000502478 SPRR2EP22531 72 aa1.44□□□□□ -2.18
CCSER1-202ENST00000502478 SPRR2BP35325 72 aa1.44□□□□□ -2.18
CCSER1-202ENST00000502478 SPRR2AP35326 72 aa1.44□□□□□ -2.18
CCSER1-202ENST00000502478 KRTAP12-1P59990 96 aa1.44□□□□□ -2.18
CCSER1-202ENST00000502478 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
CCSER1-202ENST00000502478 NEBP20929 6669 aa1.43□□□□□ -2.18
CCSER1-202ENST00000502478 MDN1Q9NU22 5596 aa1.43□□□□□ -2.18
CCSER1-202ENST00000502478 KMT2DO14686 5537 aa1.42□□□□□ -2.18
CCSER1-202ENST00000502478 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
CCSER1-202ENST00000502478 KRTAP8-1Q8IUC2 63 aa1.41□□□□□ -2.18
CCSER1-202ENST00000502478 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
CCSER1-202ENST00000502478 MT1XP80297 61 aa1.4□□□□□ -2.19
CCSER1-202ENST00000502478 SPRR2DP22532 72 aa1.38□□□□□ -2.19
CCSER1-202ENST00000502478 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
CCSER1-202ENST00000502478 TNP1P09430 55 aa1.28□□□□□ -2.2
CCSER1-202ENST00000502478 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
CCSER1-202ENST00000502478 MT1EP04732 61 aa1.25□□□□□ -2.21
CCSER1-202ENST00000502478 MT4P47944 62 aa1.24□□□□□ -2.21
CCSER1-202ENST00000502478 KRTAP19-7Q3SYF9 63 aa1.24□□□□□ -2.21
CCSER1-202ENST00000502478 KRTAP19-3Q7Z4W3 81 aa1.24□□□□□ -2.21
CCSER1-202ENST00000502478 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
CCSER1-202ENST00000502478 DSTQ03001 7570 aaKnown RBP1.21□□□□□ -2.22
CCSER1-202ENST00000502478 MT1GP13640 62 aa1.2□□□□□ -2.22
CCSER1-202ENST00000502478 MT1MQ8N339 61 aa1.19□□□□□ -2.22
CCSER1-202ENST00000502478 MT1LQ93083 61 aa1.19□□□□□ -2.22
CCSER1-202ENST00000502478 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
CCSER1-202ENST00000502478 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
CCSER1-202ENST00000502478 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
CCSER1-202ENST00000502478 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
CCSER1-202ENST00000502478 SYNE1Q8NF91 8797 aaKnown RBP1.05□□□□□ -2.24
CCSER1-202ENST00000502478 KRTAP6-1Q3LI64 71 aa1.01□□□□□ -2.25
CCSER1-202ENST00000502478 MT1AP04731 61 aa1□□□□□ -2.25
CCSER1-202ENST00000502478 KRTAP6-2Q3LI66 62 aa0.99□□□□□ -2.25
CCSER1-202ENST00000502478 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
CCSER1-202ENST00000502478 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
CCSER1-202ENST00000502478 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
CCSER1-202ENST00000502478 PRM1P04553 51 aa0.94□□□□□ -2.26
CCSER1-202ENST00000502478 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
CCSER1-202ENST00000502478 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 45.7 ms