RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 KMT2DO14686 5537 aa5.44□□□□□ -1.54
NEAT1-201ENST00000499732 MDN1Q9NU22 5596 aa5.43□□□□□ -1.54
NEAT1-201ENST00000499732 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
NEAT1-201ENST00000499732 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
NEAT1-201ENST00000499732 KRTAP2-3P0C7H8 128 aa5.31□□□□□ -1.56
NEAT1-201ENST00000499732 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
NEAT1-201ENST00000499732 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
NEAT1-201ENST00000499732 KRTAP2-4Q9BYR9 128 aa5.31□□□□□ -1.56
NEAT1-201ENST00000499732 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
NEAT1-201ENST00000499732 SPRR2EP22531 72 aa5.25□□□□□ -1.57
NEAT1-201ENST00000499732 SPRR2BP35325 72 aa5.25□□□□□ -1.57
NEAT1-201ENST00000499732 SPRR2AP35326 72 aa5.25□□□□□ -1.57
NEAT1-201ENST00000499732 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
NEAT1-201ENST00000499732 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
NEAT1-201ENST00000499732 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
NEAT1-201ENST00000499732 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
NEAT1-201ENST00000499732 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
NEAT1-201ENST00000499732 MT1EP04732 61 aa5.1□□□□□ -1.59
NEAT1-201ENST00000499732 SPRR2DP22532 72 aa5.09□□□□□ -1.59
NEAT1-201ENST00000499732 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
NEAT1-201ENST00000499732 MT1LQ93083 61 aa5.02□□□□□ -1.61
NEAT1-201ENST00000499732 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
NEAT1-201ENST00000499732 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
NEAT1-201ENST00000499732 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
NEAT1-201ENST00000499732 MT1GP13640 62 aa4.88□□□□□ -1.63
NEAT1-201ENST00000499732 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
NEAT1-201ENST00000499732 MT1MQ8N339 61 aa4.79□□□□□ -1.64
NEAT1-201ENST00000499732 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
NEAT1-201ENST00000499732 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
NEAT1-201ENST00000499732 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
NEAT1-201ENST00000499732 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
NEAT1-201ENST00000499732 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
NEAT1-201ENST00000499732 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
NEAT1-201ENST00000499732 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
NEAT1-201ENST00000499732 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
NEAT1-201ENST00000499732 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
NEAT1-201ENST00000499732 MT4P47944 62 aa4.44□□□□□ -1.7
NEAT1-201ENST00000499732 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
NEAT1-201ENST00000499732 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
NEAT1-201ENST00000499732 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
NEAT1-201ENST00000499732 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
NEAT1-201ENST00000499732 MT1AP04731 61 aa4.28□□□□□ -1.72
NEAT1-201ENST00000499732 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
NEAT1-201ENST00000499732 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
NEAT1-201ENST00000499732 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
NEAT1-201ENST00000499732 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
NEAT1-201ENST00000499732 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
NEAT1-201ENST00000499732 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
NEAT1-201ENST00000499732 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
NEAT1-201ENST00000499732 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
NEAT1-201ENST00000499732 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
NEAT1-201ENST00000499732 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
NEAT1-201ENST00000499732 PRM1P04553 51 aa3.93□□□□□ -1.78
NEAT1-201ENST00000499732 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
NEAT1-201ENST00000499732 MT3P25713 68 aa3.85□□□□□ -1.79
NEAT1-201ENST00000499732 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
NEAT1-201ENST00000499732 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
NEAT1-201ENST00000499732 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
NEAT1-201ENST00000499732 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
NEAT1-201ENST00000499732 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
NEAT1-201ENST00000499732 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
NEAT1-201ENST00000499732 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
NEAT1-201ENST00000499732 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
NEAT1-201ENST00000499732 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
NEAT1-201ENST00000499732 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
NEAT1-201ENST00000499732 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
NEAT1-201ENST00000499732 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
NEAT1-201ENST00000499732 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
NEAT1-201ENST00000499732 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
NEAT1-201ENST00000499732 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
NEAT1-201ENST00000499732 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
NEAT1-201ENST00000499732 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
NEAT1-201ENST00000499732 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
NEAT1-201ENST00000499732 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
NEAT1-201ENST00000499732 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
NEAT1-201ENST00000499732 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
NEAT1-201ENST00000499732 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms