RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	SPINT4	Q6UDR6	99 aa		4.12	□□□□□ -1.75
FXR1-222	ENST00000498658	KRTAP2-3	P0C7H8	128 aa		4.09	□□□□□ -1.75
FXR1-222	ENST00000498658	KRTAP2-4	Q9BYR9	128 aa		4.09	□□□□□ -1.75
FXR1-222	ENST00000498658	KRTAP12-1	P59990	96 aa		4.08	□□□□□ -1.76
FXR1-222	ENST00000498658	GPR98	Q8WXG9	6306 aa		4.08	□□□□□ -1.76
FXR1-222	ENST00000498658	KRTAP2-2	Q9BYT5	123 aa		4.04	□□□□□ -1.76
FXR1-222	ENST00000498658	LINC01558	Q9Y6Z2	57 aa		4.04	□□□□□ -1.76
FXR1-222	ENST00000498658	SPRR2D	P22532	72 aa		4.02	□□□□□ -1.77
FXR1-222	ENST00000498658		A8MU10	97 aa		4	□□□□□ -1.77
FXR1-222	ENST00000498658		Q1T7F1	81 aa		3.98	□□□□□ -1.77
FXR1-222	ENST00000498658	UQCR11	O14957	56 aa		3.96	□□□□□ -1.78
FXR1-222	ENST00000498658	KRTAP2-1	Q9BYU5	128 aa		3.96	□□□□□ -1.78
FXR1-222	ENST00000498658	TNP1	P09430	55 aa		3.92	□□□□□ -1.78
FXR1-222	ENST00000498658	KRTAP19-7	Q3SYF9	63 aa		3.92	□□□□□ -1.78
FXR1-222	ENST00000498658	MT1E	P04732	61 aa		3.9	□□□□□ -1.79
FXR1-222	ENST00000498658	C10orf95	Q9H7T3	257 aa		3.88	□□□□□ -1.79
FXR1-222	ENST00000498658	PSPHP1	O15172	72 aa		3.87	□□□□□ -1.79
FXR1-222	ENST00000498658	KRTAP19-3	Q7Z4W3	81 aa		3.87	□□□□□ -1.79
FXR1-222	ENST00000498658	MIR22HG	Q0VDD5	57 aa		3.86	□□□□□ -1.79
FXR1-222	ENST00000498658	KRTAP19-5	Q3LI72	72 aa		3.85	□□□□□ -1.79
FXR1-222	ENST00000498658		K7ERS5	55 aa		3.84	□□□□□ -1.79
FXR1-222	ENST00000498658	DST	Q03001	7570 aa	Known RBP	3.83	□□□□□ -1.8
FXR1-222	ENST00000498658	MT1G	P13640	62 aa		3.81	□□□□□ -1.8
FXR1-222	ENST00000498658	PP632	Q6XCG6	107 aa		3.81	□□□□□ -1.8
FXR1-222	ENST00000498658	LCE3A	Q5TA76	89 aa		3.8	□□□□□ -1.8
FXR1-222	ENST00000498658	BRK1	Q8WUW1	75 aa		3.78	□□□□□ -1.8
FXR1-222	ENST00000498658	PRO0628	Q9UI54	55 aa		3.78	□□□□□ -1.8
FXR1-222	ENST00000498658	NDUFAF8	A1L188	74 aa		3.76	□□□□□ -1.81
FXR1-222	ENST00000498658		A6NED7	52 aa		3.75	□□□□□ -1.81
FXR1-222	ENST00000498658	KRTAP25-1	Q3LHN0	102 aa		3.74	□□□□□ -1.81
FXR1-222	ENST00000498658	MT1L	Q93083	61 aa		3.74	□□□□□ -1.81
FXR1-222	ENST00000498658	CDC42SE1	Q9NRR8	79 aa		3.72	□□□□□ -1.81
FXR1-222	ENST00000498658	KRTAP12-3	P60328	96 aa		3.7	□□□□□ -1.82
FXR1-222	ENST00000498658	MT1M	Q8N339	61 aa		3.7	□□□□□ -1.82
FXR1-222	ENST00000498658	LCE1E	Q5T753	118 aa		3.67	□□□□□ -1.82
FXR1-222	ENST00000498658	PMAIP1	Q13794	54 aa		3.58	□□□□□ -1.84
FXR1-222	ENST00000498658	LCE1F	Q5T754	118 aa		3.56	□□□□□ -1.84
FXR1-222	ENST00000498658	KRTAP4-3	Q9BYR4	195 aa		3.56	□□□□□ -1.84
FXR1-222	ENST00000498658	ROMO1	P60602	79 aa		3.54	□□□□□ -1.84
FXR1-222	ENST00000498658	KRTAP5-11	Q6L8G4	156 aa		3.51	□□□□□ -1.85
FXR1-222	ENST00000498658	KRTAP5-4	Q6L8H1	288 aa		3.5	□□□□□ -1.85
FXR1-222	ENST00000498658	MT4	P47944	62 aa		3.48	□□□□□ -1.85
FXR1-222	ENST00000498658	LUZP6	Q538Z0	58 aa		3.48	□□□□□ -1.85
FXR1-222	ENST00000498658	HMCN1	Q96RW7	5635 aa		3.47	□□□□□ -1.85
FXR1-222	ENST00000498658	KTN1-AS1	Q86SY8	53 aa		3.47	□□□□□ -1.85
FXR1-222	ENST00000498658	LCE3C	Q5T5A8	94 aa		3.41	□□□□□ -1.86
FXR1-222	ENST00000498658	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.4	□□□□□ -1.87
FXR1-222	ENST00000498658	AHNAK2	Q8IVF2	5795 aa		3.4	□□□□□ -1.87
FXR1-222	ENST00000498658	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.39	□□□□□ -1.87
FXR1-222	ENST00000498658	KRTAP5-10	Q6L8G5	202 aa		3.37	□□□□□ -1.87
FXR1-222	ENST00000498658	KRTAP5-7	Q6L8G8	165 aa		3.37	□□□□□ -1.87
FXR1-222	ENST00000498658	KRTAP12-4	P60329	112 aa		3.34	□□□□□ -1.87
FXR1-222	ENST00000498658	SPRR5	A0A1B0GTR4	108 aa		3.32	□□□□□ -1.88
FXR1-222	ENST00000498658	SYNE1	Q8NF91	8797 aa	Known RBP	3.31	□□□□□ -1.88
FXR1-222	ENST00000498658	KRTAP20-2	Q3LI61	65 aa		3.29	□□□□□ -1.88
FXR1-222	ENST00000498658	KRTAP9-6	A8MVA2	160 aa		3.24	□□□□□ -1.89
FXR1-222	ENST00000498658	MT1A	P04731	61 aa		3.19	□□□□□ -1.9
FXR1-222	ENST00000498658	KRTAP6-1	Q3LI64	71 aa		3.14	□□□□□ -1.91
FXR1-222	ENST00000498658	AHNAK	Q09666	5890 aa	Known RBP	3.1	□□□□□ -1.91
FXR1-222	ENST00000498658	KRTAP5-2	Q701N4	177 aa		3.08	□□□□□ -1.92
FXR1-222	ENST00000498658	LCE3E	Q5T5B0	92 aa		3.01	□□□□□ -1.93
FXR1-222	ENST00000498658	KRTAP6-2	Q3LI66	62 aa		3	□□□□□ -1.93
FXR1-222	ENST00000498658	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.96	□□□□□ -1.94
FXR1-222	ENST00000498658	KRTAP5-1	Q6L8H4	278 aa		2.95	□□□□□ -1.94
FXR1-222	ENST00000498658	MUC5AC	P98088	5654 aa		2.93	□□□□□ -1.94
FXR1-222	ENST00000498658	OBSCN	Q5VST9	7968 aa		2.9	□□□□□ -1.95
FXR1-222	ENST00000498658	KRTAP5-8	O75690	187 aa		2.88	□□□□□ -1.95
FXR1-222	ENST00000498658	KRTAP4-4	Q9BYR3	166 aa		2.79	□□□□□ -1.96
FXR1-222	ENST00000498658	LCE1C	Q5T751	118 aa		2.5	□□□□□ -2.01
FXR1-222	ENST00000498658	LCE1B	Q5T7P3	118 aa		2.5	□□□□□ -2.01
FXR1-222	ENST00000498658	LCE3D	Q9BYE3	92 aa		2.48	□□□□□ -2.01
FXR1-222	ENST00000498658	INE1	O15225	51 aa		2.43	□□□□□ -2.02
FXR1-222	ENST00000498658	KRTAP21-2	Q3LI59	83 aa		2.08	□□□□□ -2.08
FXR1-222	ENST00000498658	PHGR1	C9JFL3	82 aa		1.98	□□□□□ -2.09
FXR1-222	ENST00000498658	MUC19	Q7Z5P9	8384 aa		1.88	□□□□□ -2.11
FXR1-222	ENST00000498658	PRM1	P04553	51 aa		1.78	□□□□□ -2.12
FXR1-222	ENST00000498658	KRTAP21-1	Q3LI58	79 aa		1.54	□□□□□ -2.16
FXR1-222	ENST00000498658	MUC16	Q8WXI7	14507 aa		1.27	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 432.8 ms