RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ADM2Q7Z4H4 148 aa2.28□□□□□ -2.04
FXN-205ENST00000498653 SEC61GP60059 68 aa2.26□□□□□ -2.05
FXN-205ENST00000498653 CRIPTQ9P021 101 aa2.25□□□□□ -2.05
FXN-205ENST00000498653 KRTAP9-6A8MVA2 160 aa2.24□□□□□ -2.05
FXN-205ENST00000498653 P0C880 135 aa2.24□□□□□ -2.05
FXN-205ENST00000498653 Q5VV11 94 aa2.24□□□□□ -2.05
FXN-205ENST00000498653 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
FXN-205ENST00000498653 A0A1B0GU69 56 aa2.23□□□□□ -2.05
FXN-205ENST00000498653 RPS28P62857 69 aaKnown RBP2.23□□□□□ -2.05
FXN-205ENST00000498653 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
FXN-205ENST00000498653 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
FXN-205ENST00000498653 PRR15LQ9BU68 103 aa2.22□□□□□ -2.05
FXN-205ENST00000498653 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
FXN-205ENST00000498653 SMIM26A0A096LP01 95 aa2.21□□□□□ -2.06
FXN-205ENST00000498653 R4GN34 69 aa2.21□□□□□ -2.06
FXN-205ENST00000498653 V9GYY9 64 aa2.21□□□□□ -2.06
FXN-205ENST00000498653 M0QZ58 72 aa2.2□□□□□ -2.06
FXN-205ENST00000498653 SPRR2GQ9BYE4 73 aa2.2□□□□□ -2.06
FXN-205ENST00000498653 A0A1B0GU33 70 aa2.19□□□□□ -2.06
FXN-205ENST00000498653 Q1T7F1 81 aa2.19□□□□□ -2.06
FXN-205ENST00000498653 PSPHP1O15172 72 aa2.16□□□□□ -2.06
FXN-205ENST00000498653 LINC01554Q52M75 96 aa2.16□□□□□ -2.06
FXN-205ENST00000498653 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
FXN-205ENST00000498653 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.07
FXN-205ENST00000498653 UQCR11O14957 56 aa2.14□□□□□ -2.07
FXN-205ENST00000498653 KRTAP12-2P59991 146 aa2.14□□□□□ -2.07
FXN-205ENST00000498653 SPATA8Q6RVD6 105 aa2.14□□□□□ -2.07
FXN-205ENST00000498653 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
FXN-205ENST00000498653 A0A0D9SG42 100 aa2.12□□□□□ -2.07
FXN-205ENST00000498653 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
FXN-205ENST00000498653 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
FXN-205ENST00000498653 A6NED7 52 aa2.1□□□□□ -2.07
FXN-205ENST00000498653 SPINT4Q6UDR6 99 aa2.09□□□□□ -2.07
FXN-205ENST00000498653 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
FXN-205ENST00000498653 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
FXN-205ENST00000498653 CAMK2N1Q7Z7J9 78 aa2.07□□□□□ -2.08
FXN-205ENST00000498653 PRO2289Q9P1D8 64 aa2.06□□□□□ -2.08
FXN-205ENST00000498653 K7ERS5 55 aa2.05□□□□□ -2.08
FXN-205ENST00000498653 MT1XP80297 61 aa2.04□□□□□ -2.08
FXN-205ENST00000498653 CDC42SE1Q9NRR8 79 aa2.04□□□□□ -2.08
FXN-205ENST00000498653 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
FXN-205ENST00000498653 KRTAP19-3Q7Z4W3 81 aa1.99□□□□□ -2.09
FXN-205ENST00000498653 BRK1Q8WUW1 75 aa1.99□□□□□ -2.09
FXN-205ENST00000498653 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
FXN-205ENST00000498653 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
FXN-205ENST00000498653 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
FXN-205ENST00000498653 TNP1P09430 55 aa1.95□□□□□ -2.1
FXN-205ENST00000498653 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
FXN-205ENST00000498653 ROMO1P60602 79 aa1.93□□□□□ -2.1
FXN-205ENST00000498653 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
FXN-205ENST00000498653 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
FXN-205ENST00000498653 PMAIP1Q13794 54 aa1.89□□□□□ -2.11
FXN-205ENST00000498653 MT1EP04732 61 aa1.85□□□□□ -2.11
FXN-205ENST00000498653 KRTAP19-7Q3SYF9 63 aa1.84□□□□□ -2.11
FXN-205ENST00000498653 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
FXN-205ENST00000498653 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
FXN-205ENST00000498653 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
FXN-205ENST00000498653 MT1MQ8N339 61 aa1.82□□□□□ -2.12
FXN-205ENST00000498653 MT1GP13640 62 aa1.8□□□□□ -2.12
FXN-205ENST00000498653 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
FXN-205ENST00000498653 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
FXN-205ENST00000498653 KTN1-AS1Q86SY8 53 aa1.77□□□□□ -2.13
FXN-205ENST00000498653 MT1LQ93083 61 aa1.75□□□□□ -2.13
FXN-205ENST00000498653 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
FXN-205ENST00000498653 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
FXN-205ENST00000498653 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
FXN-205ENST00000498653 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
FXN-205ENST00000498653 MT1AP04731 61 aa1.5□□□□□ -2.17
FXN-205ENST00000498653 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
FXN-205ENST00000498653 LUZP6Q538Z0 58 aa1.49□□□□□ -2.17
FXN-205ENST00000498653 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
FXN-205ENST00000498653 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
FXN-205ENST00000498653 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
FXN-205ENST00000498653 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
FXN-205ENST00000498653 INE1O15225 51 aa1.13□□□□□ -2.23
FXN-205ENST00000498653 PRM1P04553 51 aa0.99□□□□□ -2.25
FXN-205ENST00000498653 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms