RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
GPATCH4-209ENST00000498641 LCE3AQ5TA76 89 aa2.78□□□□□ -1.96
GPATCH4-209ENST00000498641 SYNE2Q8WXH0 6885 aaKnown RBP2.77□□□□□ -1.97
GPATCH4-209ENST00000498641 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
GPATCH4-209ENST00000498641 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
GPATCH4-209ENST00000498641 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
GPATCH4-209ENST00000498641 A0A0A0MQY5 61 aa2.71□□□□□ -1.98
GPATCH4-209ENST00000498641 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
GPATCH4-209ENST00000498641 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
GPATCH4-209ENST00000498641 KRTAP19-5Q3LI72 72 aa2.67□□□□□ -1.98
GPATCH4-209ENST00000498641 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
GPATCH4-209ENST00000498641 NEBP20929 6669 aa2.61□□□□□ -1.99
GPATCH4-209ENST00000498641 KRTAP15-1Q3LI76 137 aa2.61□□□□□ -1.99
GPATCH4-209ENST00000498641 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
GPATCH4-209ENST00000498641 MT1EP04732 61 aa2.58□□□□□ -2
GPATCH4-209ENST00000498641 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
GPATCH4-209ENST00000498641 KMT2DO14686 5537 aa2.57□□□□□ -2
GPATCH4-209ENST00000498641 MT1LQ93083 61 aa2.53□□□□□ -2
GPATCH4-209ENST00000498641 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
GPATCH4-209ENST00000498641 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
GPATCH4-209ENST00000498641 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
GPATCH4-209ENST00000498641 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
GPATCH4-209ENST00000498641 MT1GP13640 62 aa2.47□□□□□ -2.01
GPATCH4-209ENST00000498641 SPRR2EP22531 72 aa2.46□□□□□ -2.02
GPATCH4-209ENST00000498641 SPRR2BP35325 72 aa2.46□□□□□ -2.02
GPATCH4-209ENST00000498641 SPRR2AP35326 72 aa2.46□□□□□ -2.02
GPATCH4-209ENST00000498641 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
GPATCH4-209ENST00000498641 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
GPATCH4-209ENST00000498641 LCE1AQ5T7P2 110 aa2.44□□□□□ -2.02
GPATCH4-209ENST00000498641 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
GPATCH4-209ENST00000498641 MT1MQ8N339 61 aa2.43□□□□□ -2.02
GPATCH4-209ENST00000498641 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
GPATCH4-209ENST00000498641 KRTAP2-3P0C7H8 128 aa2.41□□□□□ -2.02
GPATCH4-209ENST00000498641 KRTAP2-4Q9BYR9 128 aa2.41□□□□□ -2.02
GPATCH4-209ENST00000498641 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
GPATCH4-209ENST00000498641 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
GPATCH4-209ENST00000498641 SPRR2DP22532 72 aa2.37□□□□□ -2.03
GPATCH4-209ENST00000498641 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
GPATCH4-209ENST00000498641 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
GPATCH4-209ENST00000498641 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
GPATCH4-209ENST00000498641 NDUFAF8A1L188 74 aa2.32□□□□□ -2.04
GPATCH4-209ENST00000498641 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
GPATCH4-209ENST00000498641 KRTAP2-1Q9BYU5 128 aa2.32□□□□□ -2.04
GPATCH4-209ENST00000498641 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
GPATCH4-209ENST00000498641 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
GPATCH4-209ENST00000498641 DSTQ03001 7570 aaKnown RBP2.18□□□□□ -2.06
GPATCH4-209ENST00000498641 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
GPATCH4-209ENST00000498641 MT1AP04731 61 aa2.15□□□□□ -2.07
GPATCH4-209ENST00000498641 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
GPATCH4-209ENST00000498641 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
GPATCH4-209ENST00000498641 OBSCNQ5VST9 7968 aa2.09□□□□□ -2.07
GPATCH4-209ENST00000498641 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
GPATCH4-209ENST00000498641 MT4P47944 62 aa2.06□□□□□ -2.08
GPATCH4-209ENST00000498641 MT3P25713 68 aa2.03□□□□□ -2.08
GPATCH4-209ENST00000498641 INE1O15225 51 aa2.01□□□□□ -2.09
GPATCH4-209ENST00000498641 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
GPATCH4-209ENST00000498641 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
GPATCH4-209ENST00000498641 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
GPATCH4-209ENST00000498641 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
GPATCH4-209ENST00000498641 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
GPATCH4-209ENST00000498641 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
GPATCH4-209ENST00000498641 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
GPATCH4-209ENST00000498641 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
GPATCH4-209ENST00000498641 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
GPATCH4-209ENST00000498641 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
GPATCH4-209ENST00000498641 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
GPATCH4-209ENST00000498641 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
GPATCH4-209ENST00000498641 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
GPATCH4-209ENST00000498641 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
GPATCH4-209ENST00000498641 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
GPATCH4-209ENST00000498641 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
GPATCH4-209ENST00000498641 PRM1P04553 51 aa1.57□□□□□ -2.16
GPATCH4-209ENST00000498641 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
GPATCH4-209ENST00000498641 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
GPATCH4-209ENST00000498641 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
GPATCH4-209ENST00000498641 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
GPATCH4-209ENST00000498641 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
GPATCH4-209ENST00000498641 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 76.9 ms