RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MT1EP04732 61 aa3.15□□□□□ -1.91
HMGXB4-207ENST00000498212 A0A1B0GU69 56 aa3.14□□□□□ -1.91
HMGXB4-207ENST00000498212 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
HMGXB4-207ENST00000498212 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
HMGXB4-207ENST00000498212 SMIM26A0A096LP01 95 aa3.12□□□□□ -1.91
HMGXB4-207ENST00000498212 ANAPC13Q9BS18 74 aa3.11□□□□□ -1.91
HMGXB4-207ENST00000498212 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
HMGXB4-207ENST00000498212 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
HMGXB4-207ENST00000498212 A8MU10 97 aa3.09□□□□□ -1.91
HMGXB4-207ENST00000498212 MT1GP13640 62 aa3.06□□□□□ -1.92
HMGXB4-207ENST00000498212 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
HMGXB4-207ENST00000498212 CCDC179H3BU77 68 aa3.04□□□□□ -1.92
HMGXB4-207ENST00000498212 ATP5EP56381 51 aaPredicted RBP3.04□□□□□ -1.92
HMGXB4-207ENST00000498212 PRR15LQ9BU68 103 aa3.04□□□□□ -1.92
HMGXB4-207ENST00000498212 TNP1P09430 55 aa3.03□□□□□ -1.92
HMGXB4-207ENST00000498212 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
HMGXB4-207ENST00000498212 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
HMGXB4-207ENST00000498212 MT1MQ8N339 61 aa3.01□□□□□ -1.93
HMGXB4-207ENST00000498212 MT1LQ93083 61 aa3.01□□□□□ -1.93
HMGXB4-207ENST00000498212 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
HMGXB4-207ENST00000498212 LINC01558Q9Y6Z2 57 aa3□□□□□ -1.93
HMGXB4-207ENST00000498212 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
HMGXB4-207ENST00000498212 UQCR11O14957 56 aa2.94□□□□□ -1.94
HMGXB4-207ENST00000498212 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
HMGXB4-207ENST00000498212 TMEM258P61165 79 aa2.93□□□□□ -1.94
HMGXB4-207ENST00000498212 MT4P47944 62 aa2.92□□□□□ -1.94
HMGXB4-207ENST00000498212 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
HMGXB4-207ENST00000498212 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
HMGXB4-207ENST00000498212 MT3P25713 68 aa2.88□□□□□ -1.95
HMGXB4-207ENST00000498212 MIR22HGQ0VDD5 57 aa2.86□□□□□ -1.95
HMGXB4-207ENST00000498212 KRTAP25-1Q3LHN0 102 aa2.84□□□□□ -1.95
HMGXB4-207ENST00000498212 K7ERS5 55 aa2.83□□□□□ -1.96
HMGXB4-207ENST00000498212 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
HMGXB4-207ENST00000498212 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
HMGXB4-207ENST00000498212 PSPHP1O15172 72 aa2.79□□□□□ -1.96
HMGXB4-207ENST00000498212 V9GYY9 64 aa2.79□□□□□ -1.96
HMGXB4-207ENST00000498212 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
HMGXB4-207ENST00000498212 Q1T7F1 81 aa2.76□□□□□ -1.97
HMGXB4-207ENST00000498212 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
HMGXB4-207ENST00000498212 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
HMGXB4-207ENST00000498212 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
HMGXB4-207ENST00000498212 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
HMGXB4-207ENST00000498212 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
HMGXB4-207ENST00000498212 A6NED7 52 aa2.7□□□□□ -1.98
HMGXB4-207ENST00000498212 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
HMGXB4-207ENST00000498212 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
HMGXB4-207ENST00000498212 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
HMGXB4-207ENST00000498212 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
HMGXB4-207ENST00000498212 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.99
HMGXB4-207ENST00000498212 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
HMGXB4-207ENST00000498212 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
HMGXB4-207ENST00000498212 ROMO1P60602 79 aa2.61□□□□□ -1.99
HMGXB4-207ENST00000498212 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
HMGXB4-207ENST00000498212 RPS28P62857 69 aaKnown RBP2.59□□□□□ -1.99
HMGXB4-207ENST00000498212 MT1AP04731 61 aa2.56□□□□□ -2
HMGXB4-207ENST00000498212 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
HMGXB4-207ENST00000498212 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
HMGXB4-207ENST00000498212 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
HMGXB4-207ENST00000498212 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
HMGXB4-207ENST00000498212 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-207ENST00000498212 PRO0628Q9UI54 55 aa2.28□□□□□ -2.04
HMGXB4-207ENST00000498212 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
HMGXB4-207ENST00000498212 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
HMGXB4-207ENST00000498212 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
HMGXB4-207ENST00000498212 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
HMGXB4-207ENST00000498212 PMAIP1Q13794 54 aa2.12□□□□□ -2.07
HMGXB4-207ENST00000498212 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
HMGXB4-207ENST00000498212 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
HMGXB4-207ENST00000498212 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
HMGXB4-207ENST00000498212 LCE3DQ9BYE3 92 aa1.92□□□□□ -2.1
HMGXB4-207ENST00000498212 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
HMGXB4-207ENST00000498212 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
HMGXB4-207ENST00000498212 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
HMGXB4-207ENST00000498212 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
HMGXB4-207ENST00000498212 INE1O15225 51 aa1.43□□□□□ -2.18
HMGXB4-207ENST00000498212 PRM1P04553 51 aa1.33□□□□□ -2.2
HMGXB4-207ENST00000498212 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
HMGXB4-207ENST00000498212 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms