RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, human

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-215	ENST00000498189	SSPO	A2VEC9	5147 aa		3.25	□□□□□ -1.89
BBS9-215	ENST00000498189		R4GN34	69 aa		3.25	□□□□□ -1.89
BBS9-215	ENST00000498189		S4R3F8	94 aa		3.25	□□□□□ -1.89
BBS9-215	ENST00000498189	CRIPT	Q9P021	101 aa		3.23	□□□□□ -1.89
BBS9-215	ENST00000498189	MACF1	Q9UPN3	7388 aa	Known RBP	3.23	□□□□□ -1.89
BBS9-215	ENST00000498189	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.23	□□□□□ -1.89
BBS9-215	ENST00000498189		H0YAA0	97 aa		3.2	□□□□□ -1.9
BBS9-215	ENST00000498189	PLAC4	Q8WY50	150 aa		3.2	□□□□□ -1.9
BBS9-215	ENST00000498189	INE1	O15225	51 aa		3.17	□□□□□ -1.9
BBS9-215	ENST00000498189	KRTAP6-3	Q3LI67	103 aa		3.17	□□□□□ -1.9
BBS9-215	ENST00000498189	SPRR2G	Q9BYE4	73 aa		3.16	□□□□□ -1.9
BBS9-215	ENST00000498189	SYNE2	Q8WXH0	6885 aa	Known RBP	3.15	□□□□□ -1.91
BBS9-215	ENST00000498189	KRTAP19-8	Q3LI54	63 aa		3.13	□□□□□ -1.91
BBS9-215	ENST00000498189	OBSCN	Q5VST9	7968 aa		3.09	□□□□□ -1.92
BBS9-215	ENST00000498189	MT1B	P07438	61 aa		3.06	□□□□□ -1.92
BBS9-215	ENST00000498189	C10orf95	Q9H7T3	257 aa		3.04	□□□□□ -1.92
BBS9-215	ENST00000498189	LCE3E	Q5T5B0	92 aa		3.03	□□□□□ -1.92
BBS9-215	ENST00000498189	KRTAP4-3	Q9BYR4	195 aa		3.01	□□□□□ -1.93
BBS9-215	ENST00000498189	NEB	P20929	6669 aa		2.99	□□□□□ -1.93
BBS9-215	ENST00000498189	KRTAP12-2	P59991	146 aa		2.99	□□□□□ -1.93
BBS9-215	ENST00000498189	LCE3A	Q5TA76	89 aa		2.98	□□□□□ -1.93
BBS9-215	ENST00000498189	KRTAP20-1	Q3LI63	56 aa		2.95	□□□□□ -1.94
BBS9-215	ENST00000498189		M0QZ58	72 aa		2.94	□□□□□ -1.94
BBS9-215	ENST00000498189	PP632	Q6XCG6	107 aa		2.93	□□□□□ -1.94
BBS9-215	ENST00000498189	MUC12	Q9UKN1	5478 aa		2.92	□□□□□ -1.94
BBS9-215	ENST00000498189	KRTAP2-3	P0C7H8	128 aa		2.89	□□□□□ -1.95
BBS9-215	ENST00000498189	KRTAP8-1	Q8IUC2	63 aa		2.89	□□□□□ -1.95
BBS9-215	ENST00000498189	KRTAP2-4	Q9BYR9	128 aa		2.89	□□□□□ -1.95
BBS9-215	ENST00000498189	MT1X	P80297	61 aa		2.87	□□□□□ -1.95
BBS9-215	ENST00000498189	SPRR2F	Q96RM1	72 aa		2.87	□□□□□ -1.95
BBS9-215	ENST00000498189	KMT2D	O14686	5537 aa		2.85	□□□□□ -1.95
BBS9-215	ENST00000498189	SPRR2E	P22531	72 aa		2.85	□□□□□ -1.95
BBS9-215	ENST00000498189	SPRR2B	P35325	72 aa		2.85	□□□□□ -1.95
BBS9-215	ENST00000498189	SPRR2A	P35326	72 aa		2.85	□□□□□ -1.95
BBS9-215	ENST00000498189	MDN1	Q9NU22	5596 aa		2.82	□□□□□ -1.96
BBS9-215	ENST00000498189	SPRR5	A0A1B0GTR4	108 aa		2.8	□□□□□ -1.96
BBS9-215	ENST00000498189	KRTAP2-1	Q9BYU5	128 aa		2.8	□□□□□ -1.96
BBS9-215	ENST00000498189	SPRR2D	P22532	72 aa		2.77	□□□□□ -1.97
BBS9-215	ENST00000498189	KRTAP5-2	Q701N4	177 aa		2.77	□□□□□ -1.97
BBS9-215	ENST00000498189		A0A0D9SG42	100 aa		2.75	□□□□□ -1.97
BBS9-215	ENST00000498189	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.72	□□□□□ -1.97
BBS9-215	ENST00000498189	KRTAP12-1	P59990	96 aa		2.69	□□□□□ -1.98
BBS9-215	ENST00000498189	KRTAP13-4	Q3LI77	160 aa		2.69	□□□□□ -1.98
BBS9-215	ENST00000498189	LCE1C	Q5T751	118 aa		2.6	□□□□□ -1.99
BBS9-215	ENST00000498189	LCE1B	Q5T7P3	118 aa		2.6	□□□□□ -1.99
BBS9-215	ENST00000498189	KRTAP19-3	Q7Z4W3	81 aa		2.6	□□□□□ -1.99
BBS9-215	ENST00000498189	MT1G	P13640	62 aa		2.58	□□□□□ -2
BBS9-215	ENST00000498189	TNP1	P09430	55 aa		2.57	□□□□□ -2
BBS9-215	ENST00000498189	MT1E	P04732	61 aa		2.56	□□□□□ -2
BBS9-215	ENST00000498189	KRTAP19-7	Q3SYF9	63 aa		2.56	□□□□□ -2
BBS9-215	ENST00000498189	DST	Q03001	7570 aa	Known RBP	2.53	□□□□□ -2
BBS9-215	ENST00000498189	KRTAP19-5	Q3LI72	72 aa		2.49	□□□□□ -2.01
BBS9-215	ENST00000498189	GPR98	Q8WXG9	6306 aa		2.45	□□□□□ -2.02
BBS9-215	ENST00000498189	MT1M	Q8N339	61 aa		2.44	□□□□□ -2.02
BBS9-215	ENST00000498189	MT1L	Q93083	61 aa		2.44	□□□□□ -2.02
BBS9-215	ENST00000498189	KRTAP12-3	P60328	96 aa		2.39	□□□□□ -2.03
BBS9-215	ENST00000498189	LCE3D	Q9BYE3	92 aa		2.39	□□□□□ -2.03
BBS9-215	ENST00000498189	MT4	P47944	62 aa		2.36	□□□□□ -2.03
BBS9-215	ENST00000498189	HMCN1	Q96RW7	5635 aa		2.32	□□□□□ -2.04
BBS9-215	ENST00000498189	KRTAP12-4	P60329	112 aa		2.32	□□□□□ -2.04
BBS9-215	ENST00000498189	KRTAP5-8	O75690	187 aa		2.3	□□□□□ -2.04
BBS9-215	ENST00000498189	KRTAP5-10	Q6L8G5	202 aa		2.26	□□□□□ -2.05
BBS9-215	ENST00000498189	AHNAK2	Q8IVF2	5795 aa		2.24	□□□□□ -2.05
BBS9-215	ENST00000498189	KRTAP20-2	Q3LI61	65 aa		2.23	□□□□□ -2.05
BBS9-215	ENST00000498189	KRTAP5-7	Q6L8G8	165 aa		2.23	□□□□□ -2.05
BBS9-215	ENST00000498189	SYNE1	Q8NF91	8797 aa	Known RBP	2.14	□□□□□ -2.07
BBS9-215	ENST00000498189	MT1A	P04731	61 aa		2.12	□□□□□ -2.07
BBS9-215	ENST00000498189	MUC19	Q7Z5P9	8384 aa		2.12	□□□□□ -2.07
BBS9-215	ENST00000498189	KRTAP6-1	Q3LI64	71 aa		2.03	□□□□□ -2.08
BBS9-215	ENST00000498189	KRTAP6-2	Q3LI66	62 aa		1.97	□□□□□ -2.09
BBS9-215	ENST00000498189	AHNAK	Q09666	5890 aa	Known RBP	1.89	□□□□□ -2.11
BBS9-215	ENST00000498189	MUC5AC	P98088	5654 aa		1.88	□□□□□ -2.11
BBS9-215	ENST00000498189	KRTAP21-2	Q3LI59	83 aa		1.86	□□□□□ -2.11
BBS9-215	ENST00000498189	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.84	□□□□□ -2.11
BBS9-215	ENST00000498189	PRM1	P04553	51 aa		1.76	□□□□□ -2.13
BBS9-215	ENST00000498189	PHGR1	C9JFL3	82 aa		1.34	□□□□□ -2.19
BBS9-215	ENST00000498189	KRTAP21-1	Q3LI58	79 aa		1.27	□□□□□ -2.21
BBS9-215	ENST00000498189	MUC16	Q8WXI7	14507 aa		0.88	□□□□□ -2.27

Retrieved 78 of 20,778 RNA–protein pairs in 48.3 ms