RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 COX6B2Q6YFQ2 88 aa0.99□□□□□ -2.25
RIF1-212ENST00000498041 ATP11AUNQ6ZP68 121 aa0.99□□□□□ -2.25
RIF1-212ENST00000498041 CRIPTQ9P021 101 aa0.99□□□□□ -2.25
RIF1-212ENST00000498041 TPRXLQ17RH7 258 aa0.98□□□□□ -2.25
RIF1-212ENST00000498041 Q5VV11 94 aa0.98□□□□□ -2.25
RIF1-212ENST00000498041 DMAC1Q96GE9 116 aa0.98□□□□□ -2.25
RIF1-212ENST00000498041 PRR15LQ9BU68 103 aa0.98□□□□□ -2.25
RIF1-212ENST00000498041 TP53AIP1Q9HCN2 124 aa0.98□□□□□ -2.25
RIF1-212ENST00000498041 LOC101927531A0A1B0GV80 90 aa0.97□□□□□ -2.25
RIF1-212ENST00000498041 MT2AP02795 61 aa0.97□□□□□ -2.25
RIF1-212ENST00000498041 TMEM258P61165 79 aa0.97□□□□□ -2.25
RIF1-212ENST00000498041 SERP1Q9Y6X1 66 aa0.97□□□□□ -2.25
RIF1-212ENST00000498041 A0A0D9SG42 100 aa0.96□□□□□ -2.26
RIF1-212ENST00000498041 KRTAP2-3P0C7H8 128 aa0.96□□□□□ -2.26
RIF1-212ENST00000498041 H1FX-AS1Q4G0G2 97 aa0.96□□□□□ -2.26
RIF1-212ENST00000498041 KRTAP2-4Q9BYR9 128 aa0.96□□□□□ -2.26
RIF1-212ENST00000498041 H0YAA0 97 aa0.95□□□□□ -2.26
RIF1-212ENST00000498041 ACYP2P14621 99 aa0.95□□□□□ -2.26
RIF1-212ENST00000498041 RPS28P62857 69 aaKnown RBP0.95□□□□□ -2.26
RIF1-212ENST00000498041 LINC01558Q9Y6Z2 57 aa0.95□□□□□ -2.26
RIF1-212ENST00000498041 S4R3F8 94 aa0.95□□□□□ -2.26
RIF1-212ENST00000498041 FLGP20930 4061 aaPredicted RBP0.94□□□□□ -2.26
RIF1-212ENST00000498041 A6NED7 52 aa0.94□□□□□ -2.26
RIF1-212ENST00000498041 H3BPC8 53 aa0.94□□□□□ -2.26
RIF1-212ENST00000498041 CHKB-CPT1BH3BT56 60 aa0.94□□□□□ -2.26
RIF1-212ENST00000498041 MT1BP07438 61 aa0.93□□□□□ -2.26
RIF1-212ENST00000498041 Q1T7F1 81 aa0.93□□□□□ -2.26
RIF1-212ENST00000498041 LINC01554Q52M75 96 aa0.93□□□□□ -2.26
RIF1-212ENST00000498041 C10orf95Q9H7T3 257 aa0.93□□□□□ -2.26
RIF1-212ENST00000498041 NDUFC1O43677 76 aa0.92□□□□□ -2.26
RIF1-212ENST00000498041 RBM12B-AS1Q9P1G2 102 aa0.92□□□□□ -2.26
RIF1-212ENST00000498041 A0A1B0GU69 56 aa0.91□□□□□ -2.26
RIF1-212ENST00000498041 M0R2T5 61 aa0.91□□□□□ -2.26
RIF1-212ENST00000498041 BRK1Q8WUW1 75 aa0.91□□□□□ -2.26
RIF1-212ENST00000498041 M0QZ58 72 aa0.9□□□□□ -2.27
RIF1-212ENST00000498041 CSAG1Q6PB30 78 aa0.9□□□□□ -2.27
RIF1-212ENST00000498041 SPTSSBQ8NFR3 76 aa0.9□□□□□ -2.27
RIF1-212ENST00000498041 A6NN06 94 aa0.89□□□□□ -2.27
RIF1-212ENST00000498041 MIR22HGQ0VDD5 57 aa0.89□□□□□ -2.27
RIF1-212ENST00000498041 KRTAP2-1Q9BYU5 128 aa0.89□□□□□ -2.27
RIF1-212ENST00000498041 V9GYY9 64 aa0.89□□□□□ -2.27
RIF1-212ENST00000498041 ATP5EP56381 51 aaPredicted RBP0.88□□□□□ -2.27
RIF1-212ENST00000498041 MT1XP80297 61 aa0.88□□□□□ -2.27
RIF1-212ENST00000498041 KRTAP19-8Q3LI54 63 aa0.86□□□□□ -2.27
RIF1-212ENST00000498041 CDC42SE1Q9NRR8 79 aa0.86□□□□□ -2.27
RIF1-212ENST00000498041 SPRR2GQ9BYE4 73 aa0.85□□□□□ -2.27
RIF1-212ENST00000498041 UQCR11O14957 56 aa0.84□□□□□ -2.27
RIF1-212ENST00000498041 PMAIP1Q13794 54 aa0.84□□□□□ -2.27
RIF1-212ENST00000498041 KRTAP19-5Q3LI72 72 aa0.82□□□□□ -2.28
RIF1-212ENST00000498041 ROMO1P60602 79 aa0.8□□□□□ -2.28
RIF1-212ENST00000498041 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
RIF1-212ENST00000498041 KRTAP19-6Q3LI70 58 aa0.79□□□□□ -2.28
RIF1-212ENST00000498041 PLAC4Q8WY50 150 aa0.79□□□□□ -2.28
RIF1-212ENST00000498041 KTN1-AS1Q86SY8 53 aa0.76□□□□□ -2.29
RIF1-212ENST00000498041 MT1EP04732 61 aa0.75□□□□□ -2.29
RIF1-212ENST00000498041 MT1GP13640 62 aa0.74□□□□□ -2.29
RIF1-212ENST00000498041 MT1LQ93083 61 aa0.74□□□□□ -2.29
RIF1-212ENST00000498041 TNP1P09430 55 aa0.73□□□□□ -2.29
RIF1-212ENST00000498041 KRTAP8-1Q8IUC2 63 aa0.73□□□□□ -2.29
RIF1-212ENST00000498041 SPRR2FQ96RM1 72 aa0.73□□□□□ -2.29
RIF1-212ENST00000498041 MT1MQ8N339 61 aa0.72□□□□□ -2.29
RIF1-212ENST00000498041 PRO2289Q9P1D8 64 aa0.72□□□□□ -2.29
RIF1-212ENST00000498041 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
RIF1-212ENST00000498041 SPRR2EP22531 72 aa0.7□□□□□ -2.3
RIF1-212ENST00000498041 SPRR2BP35325 72 aa0.7□□□□□ -2.3
RIF1-212ENST00000498041 SPRR2AP35326 72 aa0.7□□□□□ -2.3
RIF1-212ENST00000498041 KRTAP19-3Q7Z4W3 81 aa0.69□□□□□ -2.3
RIF1-212ENST00000498041 KRTAP6-1Q3LI64 71 aa0.68□□□□□ -2.3
RIF1-212ENST00000498041 SPRR2DP22532 72 aa0.66□□□□□ -2.3
RIF1-212ENST00000498041 MT4P47944 62 aa0.64□□□□□ -2.31
RIF1-212ENST00000498041 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
RIF1-212ENST00000498041 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
RIF1-212ENST00000498041 MT1AP04731 61 aa0.6□□□□□ -2.31
RIF1-212ENST00000498041 KRTAP6-2Q3LI66 62 aa0.6□□□□□ -2.31
RIF1-212ENST00000498041 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
RIF1-212ENST00000498041 PRM1P04553 51 aa0.49□□□□□ -2.33
RIF1-212ENST00000498041 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
RIF1-212ENST00000498041 INE1O15225 51 aa0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 81.1 ms