RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 H3BNG1 76 aa2.34□□□□□ -2.03
NEB-216ENST00000497809 LRP1BQ9NZR2 4599 aa2.32□□□□□ -2.04
NEB-216ENST00000497809 LRP2P98164 4655 aa2.31□□□□□ -2.04
NEB-216ENST00000497809 FAT1Q14517 4588 aa2.31□□□□□ -2.04
NEB-216ENST00000497809 DNAH6Q9C0G6 4158 aa2.3□□□□□ -2.04
NEB-216ENST00000497809 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
NEB-216ENST00000497809 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
NEB-216ENST00000497809 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
NEB-216ENST00000497809 DNAH8Q96JB1 4490 aa2.25□□□□□ -2.05
NEB-216ENST00000497809 M0R2T5 61 aa2.25□□□□□ -2.05
NEB-216ENST00000497809 APOBP04114 4563 aaKnown RBP2.25□□□□□ -2.05
NEB-216ENST00000497809 HTN3P15516 51 aa2.24□□□□□ -2.05
NEB-216ENST00000497809 MACF1Q9UPN3 7388 aaKnown RBP2.24□□□□□ -2.05
NEB-216ENST00000497809 DNAH2Q9P225 4427 aa2.24□□□□□ -2.05
NEB-216ENST00000497809 USH2AO75445 5202 aa2.23□□□□□ -2.05
NEB-216ENST00000497809 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
NEB-216ENST00000497809 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
NEB-216ENST00000497809 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
NEB-216ENST00000497809 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
NEB-216ENST00000497809 C9orf92A6NGG3 77 aa2.21□□□□□ -2.05
NEB-216ENST00000497809 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
NEB-216ENST00000497809 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
NEB-216ENST00000497809 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
NEB-216ENST00000497809 LRP1Q07954 4544 aaKnown RBP2.19□□□□□ -2.06
NEB-216ENST00000497809 DNAH17Q9UFH2 4485 aa2.19□□□□□ -2.06
NEB-216ENST00000497809 DNAH5Q8TE73 4624 aa2.18□□□□□ -2.06
NEB-216ENST00000497809 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
NEB-216ENST00000497809 PKD1P98161 4303 aa2.15□□□□□ -2.06
NEB-216ENST00000497809 DEFB4AO15263 64 aa2.14□□□□□ -2.07
NEB-216ENST00000497809 KMT2DO14686 5537 aa2.14□□□□□ -2.07
NEB-216ENST00000497809 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
NEB-216ENST00000497809 RPS29P62273 56 aaKnown RBP2.1□□□□□ -2.07
NEB-216ENST00000497809 TNXBP22105 4242 aa2.07□□□□□ -2.08
NEB-216ENST00000497809 SMR3BP02814 79 aaPredicted RBP2.07□□□□□ -2.08
NEB-216ENST00000497809 KRTAP8-1Q8IUC2 63 aa2.07□□□□□ -2.08
NEB-216ENST00000497809 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
NEB-216ENST00000497809 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
NEB-216ENST00000497809 PRM1P04553 51 aa1.99□□□□□ -2.09
NEB-216ENST00000497809 MDN1Q9NU22 5596 aa1.92□□□□□ -2.1
NEB-216ENST00000497809 MT1HL1P0DM35 61 aa1.89□□□□□ -2.11
NEB-216ENST00000497809 LPAP08519 4548 aa1.86□□□□□ -2.11
NEB-216ENST00000497809 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
NEB-216ENST00000497809 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
NEB-216ENST00000497809 KRTAP19-3Q7Z4W3 81 aa1.81□□□□□ -2.12
NEB-216ENST00000497809 DSTQ03001 7570 aaKnown RBP1.79□□□□□ -2.12
NEB-216ENST00000497809 FLGP20930 4061 aaPredicted RBP1.78□□□□□ -2.12
NEB-216ENST00000497809 MUC17Q685J3 4493 aa1.78□□□□□ -2.12
NEB-216ENST00000497809 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
NEB-216ENST00000497809 KRTAP19-6Q3LI70 58 aa1.72□□□□□ -2.13
NEB-216ENST00000497809 SPRR2EP22531 72 aa1.68□□□□□ -2.14
NEB-216ENST00000497809 SPRR2BP35325 72 aa1.68□□□□□ -2.14
NEB-216ENST00000497809 SPRR2AP35326 72 aa1.68□□□□□ -2.14
NEB-216ENST00000497809 MT1AP04731 61 aa1.66□□□□□ -2.14
NEB-216ENST00000497809 SPRR2DP22532 72 aa1.65□□□□□ -2.15
NEB-216ENST00000497809 MT1HP80294 61 aa1.64□□□□□ -2.15
NEB-216ENST00000497809 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
NEB-216ENST00000497809 KRTAP4-1Q9BYQ7 146 aa1.62□□□□□ -2.15
NEB-216ENST00000497809 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
NEB-216ENST00000497809 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
NEB-216ENST00000497809 KRTAP19-2Q3LHN2 52 aa1.55□□□□□ -2.16
NEB-216ENST00000497809 MT4P47944 62 aa1.48□□□□□ -2.17
NEB-216ENST00000497809 MT2AP02795 61 aa1.46□□□□□ -2.18
NEB-216ENST00000497809 SPRR2FQ96RM1 72 aa1.46□□□□□ -2.18
NEB-216ENST00000497809 MT1FP04733 61 aa1.45□□□□□ -2.18
NEB-216ENST00000497809 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
NEB-216ENST00000497809 SPRR2GQ9BYE4 73 aa1.43□□□□□ -2.18
NEB-216ENST00000497809 MT1EP04732 61 aa1.39□□□□□ -2.19
NEB-216ENST00000497809 MT1LQ93083 61 aa1.35□□□□□ -2.19
NEB-216ENST00000497809 MT1XP80297 61 aa1.3□□□□□ -2.2
NEB-216ENST00000497809 MT1BP07438 61 aa1.23□□□□□ -2.21
NEB-216ENST00000497809 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
NEB-216ENST00000497809 KRTAP19-8Q3LI54 63 aa1.2□□□□□ -2.22
NEB-216ENST00000497809 KRTAP20-2Q3LI61 65 aa1.19□□□□□ -2.22
NEB-216ENST00000497809 MT1GP13640 62 aa1.15□□□□□ -2.23
NEB-216ENST00000497809 KRTAP19-7Q3SYF9 63 aa1.14□□□□□ -2.23
NEB-216ENST00000497809 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
NEB-216ENST00000497809 MT1MQ8N339 61 aa0.97□□□□□ -2.25
NEB-216ENST00000497809 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 56.4 ms