RNA–Protein interactions for RNA: ENST00000497586.5

SFMBT1-208, Transcript of Scm like with four mbt domains 1, human

TSL 4

Gene SFMBT1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFMBT1-208	ENST00000497586	SMIM26	A0A096LP01	95 aa		4.7	□□□□□ -1.66
SFMBT1-208	ENST00000497586	SEC61G	P60059	68 aa		4.7	□□□□□ -1.66
SFMBT1-208	ENST00000497586	MUC5AC	P98088	5654 aa		4.66	□□□□□ -1.66
SFMBT1-208	ENST00000497586	ACYP2	P14621	99 aa		4.66	□□□□□ -1.66
SFMBT1-208	ENST00000497586	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.59	□□□□□ -1.67
SFMBT1-208	ENST00000497586	CHKB-CPT1B	H3BT56	60 aa		4.59	□□□□□ -1.67
SFMBT1-208	ENST00000497586	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.56	□□□□□ -1.68
SFMBT1-208	ENST00000497586	C10orf95	Q9H7T3	257 aa		4.56	□□□□□ -1.68
SFMBT1-208	ENST00000497586	KRTAP12-4	P60329	112 aa		4.55	□□□□□ -1.68
SFMBT1-208	ENST00000497586	PMAIP1	Q13794	54 aa		4.54	□□□□□ -1.68
SFMBT1-208	ENST00000497586	KRTAP4-11	Q9BYQ6	195 aa		4.54	□□□□□ -1.68
SFMBT1-208	ENST00000497586	KRTAP4-7	Q9BYR0	210 aa		4.52	□□□□□ -1.69
SFMBT1-208	ENST00000497586		H7BZZ5	65 aa		4.51	□□□□□ -1.69
SFMBT1-208	ENST00000497586	LCE3A	Q5TA76	89 aa		4.5	□□□□□ -1.69
SFMBT1-208	ENST00000497586	BRK1	Q8WUW1	75 aa		4.49	□□□□□ -1.69
SFMBT1-208	ENST00000497586	SPINT4	Q6UDR6	99 aa		4.47	□□□□□ -1.69
SFMBT1-208	ENST00000497586	KRTAP5-8	O75690	187 aa		4.45	□□□□□ -1.7
SFMBT1-208	ENST00000497586		Q1T7F1	81 aa		4.45	□□□□□ -1.7
SFMBT1-208	ENST00000497586	SYNE1	Q8NF91	8797 aa	Known RBP	4.42	□□□□□ -1.7
SFMBT1-208	ENST00000497586	KRTAP12-1	P59990	96 aa		4.41	□□□□□ -1.7
SFMBT1-208	ENST00000497586	SPATA8	Q6RVD6	105 aa		4.38	□□□□□ -1.71
SFMBT1-208	ENST00000497586	KTN1-AS1	Q86SY8	53 aa		4.35	□□□□□ -1.71
SFMBT1-208	ENST00000497586	TNP1	P09430	55 aa		4.34	□□□□□ -1.71
SFMBT1-208	ENST00000497586	KRTAP12-3	P60328	96 aa		4.32	□□□□□ -1.72
SFMBT1-208	ENST00000497586	LOC100996750	A0A140TA64	210 aa		4.3	□□□□□ -1.72
SFMBT1-208	ENST00000497586	SNURF	Q9Y675	71 aa		4.3	□□□□□ -1.72
SFMBT1-208	ENST00000497586	KRTAP9-9	Q9BYP9	154 aa		4.29	□□□□□ -1.72
SFMBT1-208	ENST00000497586	KRTAP5-2	Q701N4	177 aa		4.28	□□□□□ -1.72
SFMBT1-208	ENST00000497586	SPANXA2-OT1	Q8N9U9	137 aa		4.28	□□□□□ -1.72
SFMBT1-208	ENST00000497586		A0A1B0GU33	70 aa		4.25	□□□□□ -1.73
SFMBT1-208	ENST00000497586	CDC42SE1	Q9NRR8	79 aa		4.21	□□□□□ -1.74
SFMBT1-208	ENST00000497586	COA5	Q86WW8	74 aa		4.17	□□□□□ -1.74
SFMBT1-208	ENST00000497586	PSPHP1	O15172	72 aa		4.15	□□□□□ -1.75
SFMBT1-208	ENST00000497586		A6NED7	52 aa		4.14	□□□□□ -1.75
SFMBT1-208	ENST00000497586		A8MU10	97 aa		4.12	□□□□□ -1.75
SFMBT1-208	ENST00000497586	LINC01558	Q9Y6Z2	57 aa		4.12	□□□□□ -1.75
SFMBT1-208	ENST00000497586	OBSCN	Q5VST9	7968 aa		4.11	□□□□□ -1.75
SFMBT1-208	ENST00000497586	PRR15L	Q9BU68	103 aa		4.1	□□□□□ -1.75
SFMBT1-208	ENST00000497586	MT1A	P04731	61 aa		4.08	□□□□□ -1.76
SFMBT1-208	ENST00000497586	KRTAP6-1	Q3LI64	71 aa		4.08	□□□□□ -1.76
SFMBT1-208	ENST00000497586	KRTAP19-4	Q3LI73	84 aa		4.05	□□□□□ -1.76
SFMBT1-208	ENST00000497586		H3BS24	57 aa		4.02	□□□□□ -1.77
SFMBT1-208	ENST00000497586	KRTAP6-2	Q3LI66	62 aa		3.99	□□□□□ -1.77
SFMBT1-208	ENST00000497586	KRTAP5-1	Q6L8H4	278 aa		3.97	□□□□□ -1.77
SFMBT1-208	ENST00000497586	KRTAP9-4	Q9BYQ2	154 aa		3.97	□□□□□ -1.77
SFMBT1-208	ENST00000497586		A0A1B0GU69	56 aa		3.96	□□□□□ -1.78
SFMBT1-208	ENST00000497586	KRTAP25-1	Q3LHN0	102 aa		3.92	□□□□□ -1.78
SFMBT1-208	ENST00000497586	LCE3C	Q5T5A8	94 aa		3.92	□□□□□ -1.78
SFMBT1-208	ENST00000497586	UQCR11	O14957	56 aa		3.91	□□□□□ -1.78
SFMBT1-208	ENST00000497586	KRTAP15-1	Q3LI76	137 aa		3.85	□□□□□ -1.79
SFMBT1-208	ENST00000497586	MIR22HG	Q0VDD5	57 aa		3.84	□□□□□ -1.79
SFMBT1-208	ENST00000497586	ROMO1	P60602	79 aa		3.78	□□□□□ -1.8
SFMBT1-208	ENST00000497586	PRAC1	Q96KF2	57 aa		3.77	□□□□□ -1.81
SFMBT1-208	ENST00000497586	MT3	P25713	68 aa		3.75	□□□□□ -1.81
SFMBT1-208	ENST00000497586		K7ERS5	55 aa		3.74	□□□□□ -1.81
SFMBT1-208	ENST00000497586	KRTAP9-6	A8MVA2	160 aa		3.72	□□□□□ -1.81
SFMBT1-208	ENST00000497586	KRTAP23-1	A1A580	65 aa		3.67	□□□□□ -1.82
SFMBT1-208	ENST00000497586		A0A0A0MQY5	61 aa		3.57	□□□□□ -1.84
SFMBT1-208	ENST00000497586	LCE1E	Q5T753	118 aa		3.57	□□□□□ -1.84
SFMBT1-208	ENST00000497586	KRTAP4-2	Q9BYR5	136 aa		3.43	□□□□□ -1.86
SFMBT1-208	ENST00000497586	NDUFAF8	A1L188	74 aa		3.41	□□□□□ -1.86
SFMBT1-208	ENST00000497586	LUZP6	Q538Z0	58 aa		3.41	□□□□□ -1.86
SFMBT1-208	ENST00000497586	LCE1B	Q5T7P3	118 aa		3.39	□□□□□ -1.87
SFMBT1-208	ENST00000497586	LCE1C	Q5T751	118 aa		3.32	□□□□□ -1.88
SFMBT1-208	ENST00000497586	KRTAP4-12	Q9BQ66	201 aa		3.28	□□□□□ -1.88
SFMBT1-208	ENST00000497586	KRTAP5-11	Q6L8G4	156 aa		3.24	□□□□□ -1.89
SFMBT1-208	ENST00000497586	PHGR1	C9JFL3	82 aa		3.18	□□□□□ -1.9
SFMBT1-208	ENST00000497586	LCE1F	Q5T754	118 aa		3.14	□□□□□ -1.91
SFMBT1-208	ENST00000497586	INE1	O15225	51 aa		3.07	□□□□□ -1.92
SFMBT1-208	ENST00000497586	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.97	□□□□□ -1.93
SFMBT1-208	ENST00000497586	LCE3D	Q9BYE3	92 aa		2.71	□□□□□ -1.98
SFMBT1-208	ENST00000497586	KRTAP21-2	Q3LI59	83 aa		2.69	□□□□□ -1.98
SFMBT1-208	ENST00000497586	MUC19	Q7Z5P9	8384 aa		2.6	□□□□□ -1.99
SFMBT1-208	ENST00000497586	KRTAP4-4	Q9BYR3	166 aa		2.53	□□□□□ -2
SFMBT1-208	ENST00000497586	LCE3E	Q5T5B0	92 aa		2.47	□□□□□ -2.01
SFMBT1-208	ENST00000497586	KRTAP21-1	Q3LI58	79 aa		2.45	□□□□□ -2.02
SFMBT1-208	ENST00000497586	MUC16	Q8WXI7	14507 aa		1.81	□□□□□ -2.12
SFMBT1-208	ENST00000497586	PRM1	P04553	51 aa		1.79	□□□□□ -2.12

Retrieved 78 of 20,778 RNA–protein pairs in 13 ms