RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
RPN1-208ENST00000497415 LCE5AQ5TCM9 118 aa6.91□□□□□ -1.3
RPN1-208ENST00000497415 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
RPN1-208ENST00000497415 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
RPN1-208ENST00000497415 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
RPN1-208ENST00000497415 PSPHP1O15172 72 aa6.79□□□□□ -1.32
RPN1-208ENST00000497415 TNP1P09430 55 aa6.79□□□□□ -1.32
RPN1-208ENST00000497415 KRTAP4-2Q9BYR5 136 aa6.79□□□□□ -1.32
RPN1-208ENST00000497415 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
RPN1-208ENST00000497415 MT1GP13640 62 aa6.74□□□□□ -1.33
RPN1-208ENST00000497415 KRTAP19-4Q3LI73 84 aa6.73□□□□□ -1.33
RPN1-208ENST00000497415 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
RPN1-208ENST00000497415 DSTQ03001 7570 aaKnown RBP6.71□□□□□ -1.34
RPN1-208ENST00000497415 KRTAP4-11Q9BYQ6 195 aa6.68□□□□□ -1.34
RPN1-208ENST00000497415 MT1LQ93083 61 aa6.67□□□□□ -1.34
RPN1-208ENST00000497415 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
RPN1-208ENST00000497415 K7ERS5 55 aa6.65□□□□□ -1.34
RPN1-208ENST00000497415 A6NED7 52 aa6.62□□□□□ -1.35
RPN1-208ENST00000497415 MT1MQ8N339 61 aa6.62□□□□□ -1.35
RPN1-208ENST00000497415 H3BS24 57 aa6.59□□□□□ -1.35
RPN1-208ENST00000497415 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
RPN1-208ENST00000497415 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
RPN1-208ENST00000497415 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
RPN1-208ENST00000497415 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
RPN1-208ENST00000497415 KRTAP5-4Q6L8H1 288 aa6.29□□□□□ -1.4
RPN1-208ENST00000497415 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
RPN1-208ENST00000497415 MT4P47944 62 aa6.25□□□□□ -1.41
RPN1-208ENST00000497415 HMCN1Q96RW7 5635 aa6.2□□□□□ -1.42
RPN1-208ENST00000497415 ROMO1P60602 79 aa6.2□□□□□ -1.42
RPN1-208ENST00000497415 GPR98Q8WXG9 6306 aa6.16□□□□□ -1.42
RPN1-208ENST00000497415 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
RPN1-208ENST00000497415 KRTAP5-5Q701N2 237 aaPredicted RBP6.08□□□□□ -1.44
RPN1-208ENST00000497415 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
RPN1-208ENST00000497415 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
RPN1-208ENST00000497415 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
RPN1-208ENST00000497415 AHNAK2Q8IVF2 5795 aa5.97□□□□□ -1.45
RPN1-208ENST00000497415 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
RPN1-208ENST00000497415 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
RPN1-208ENST00000497415 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
RPN1-208ENST00000497415 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
RPN1-208ENST00000497415 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
RPN1-208ENST00000497415 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
RPN1-208ENST00000497415 PMAIP1Q13794 54 aa5.77□□□□□ -1.49
RPN1-208ENST00000497415 MT1AP04731 61 aa5.67□□□□□ -1.5
RPN1-208ENST00000497415 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
RPN1-208ENST00000497415 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
RPN1-208ENST00000497415 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
RPN1-208ENST00000497415 KRTAP5-7Q6L8G8 165 aa5.63□□□□□ -1.51
RPN1-208ENST00000497415 KRTAP5-2Q701N4 177 aa5.53□□□□□ -1.52
RPN1-208ENST00000497415 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
RPN1-208ENST00000497415 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
RPN1-208ENST00000497415 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
RPN1-208ENST00000497415 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
RPN1-208ENST00000497415 MT3P25713 68 aa5.18□□□□□ -1.58
RPN1-208ENST00000497415 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
RPN1-208ENST00000497415 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
RPN1-208ENST00000497415 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.62
RPN1-208ENST00000497415 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
RPN1-208ENST00000497415 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
RPN1-208ENST00000497415 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
RPN1-208ENST00000497415 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
RPN1-208ENST00000497415 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
RPN1-208ENST00000497415 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
RPN1-208ENST00000497415 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
RPN1-208ENST00000497415 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
RPN1-208ENST00000497415 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
RPN1-208ENST00000497415 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
RPN1-208ENST00000497415 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
RPN1-208ENST00000497415 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
RPN1-208ENST00000497415 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
RPN1-208ENST00000497415 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
RPN1-208ENST00000497415 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
RPN1-208ENST00000497415 INE1O15225 51 aa3.5□□□□□ -1.85
RPN1-208ENST00000497415 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
RPN1-208ENST00000497415 PRM1P04553 51 aa3.14□□□□□ -1.91
RPN1-208ENST00000497415 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
RPN1-208ENST00000497415 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
RPN1-208ENST00000497415 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 27.2 ms