RNA–Protein interactions for RNA: ENST00000497210.5

CTPS1-211, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-211ENST00000497210 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
CTPS1-211ENST00000497210 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
CTPS1-211ENST00000497210 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
CTPS1-211ENST00000497210 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
CTPS1-211ENST00000497210 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
CTPS1-211ENST00000497210 BRK1Q8WUW1 75 aa4.09□□□□□ -1.75
CTPS1-211ENST00000497210 CRCT1Q9UGL9 99 aa4.09□□□□□ -1.75
CTPS1-211ENST00000497210 SSPOA2VEC9 5147 aa4.09□□□□□ -1.75
CTPS1-211ENST00000497210 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
CTPS1-211ENST00000497210 MT1XP80297 61 aa4.03□□□□□ -1.76
CTPS1-211ENST00000497210 FCGBPQ9Y6R7 5405 aaPredicted RBP3.92□□□□□ -1.78
CTPS1-211ENST00000497210 TNP1P09430 55 aa3.92□□□□□ -1.78
CTPS1-211ENST00000497210 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
CTPS1-211ENST00000497210 ROMO1P60602 79 aa3.9□□□□□ -1.79
CTPS1-211ENST00000497210 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
CTPS1-211ENST00000497210 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
CTPS1-211ENST00000497210 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
CTPS1-211ENST00000497210 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
CTPS1-211ENST00000497210 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
CTPS1-211ENST00000497210 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
CTPS1-211ENST00000497210 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
CTPS1-211ENST00000497210 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
CTPS1-211ENST00000497210 KMT2DO14686 5537 aa3.71□□□□□ -1.82
CTPS1-211ENST00000497210 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
CTPS1-211ENST00000497210 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
CTPS1-211ENST00000497210 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
CTPS1-211ENST00000497210 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
CTPS1-211ENST00000497210 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
CTPS1-211ENST00000497210 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
CTPS1-211ENST00000497210 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
CTPS1-211ENST00000497210 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
CTPS1-211ENST00000497210 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CTPS1-211ENST00000497210 MT1EP04732 61 aa3.56□□□□□ -1.84
CTPS1-211ENST00000497210 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
CTPS1-211ENST00000497210 SPRR2EP22531 72 aa3.5□□□□□ -1.85
CTPS1-211ENST00000497210 SPRR2BP35325 72 aa3.5□□□□□ -1.85
CTPS1-211ENST00000497210 SPRR2AP35326 72 aa3.5□□□□□ -1.85
CTPS1-211ENST00000497210 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
CTPS1-211ENST00000497210 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
CTPS1-211ENST00000497210 MT1LQ93083 61 aa3.46□□□□□ -1.86
CTPS1-211ENST00000497210 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
CTPS1-211ENST00000497210 MT1GP13640 62 aa3.43□□□□□ -1.86
CTPS1-211ENST00000497210 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
CTPS1-211ENST00000497210 NEBP20929 6669 aa3.39□□□□□ -1.87
CTPS1-211ENST00000497210 SPRR2DP22532 72 aa3.39□□□□□ -1.87
CTPS1-211ENST00000497210 MT1MQ8N339 61 aa3.36□□□□□ -1.87
CTPS1-211ENST00000497210 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
CTPS1-211ENST00000497210 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
CTPS1-211ENST00000497210 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
CTPS1-211ENST00000497210 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
CTPS1-211ENST00000497210 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
CTPS1-211ENST00000497210 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
CTPS1-211ENST00000497210 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
CTPS1-211ENST00000497210 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
CTPS1-211ENST00000497210 LCE1CQ5T751 118 aa3□□□□□ -1.93
CTPS1-211ENST00000497210 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
CTPS1-211ENST00000497210 MT1AP04731 61 aa2.96□□□□□ -1.94
CTPS1-211ENST00000497210 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
CTPS1-211ENST00000497210 MT4P47944 62 aa2.91□□□□□ -1.94
CTPS1-211ENST00000497210 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
CTPS1-211ENST00000497210 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
CTPS1-211ENST00000497210 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
CTPS1-211ENST00000497210 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
CTPS1-211ENST00000497210 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
CTPS1-211ENST00000497210 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
CTPS1-211ENST00000497210 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
CTPS1-211ENST00000497210 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
CTPS1-211ENST00000497210 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
CTPS1-211ENST00000497210 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
CTPS1-211ENST00000497210 INE1O15225 51 aa2.35□□□□□ -2.03
CTPS1-211ENST00000497210 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
CTPS1-211ENST00000497210 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
CTPS1-211ENST00000497210 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
CTPS1-211ENST00000497210 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
CTPS1-211ENST00000497210 PRM1P04553 51 aa2□□□□□ -2.09
CTPS1-211ENST00000497210 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
CTPS1-211ENST00000497210 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
CTPS1-211ENST00000497210 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms