RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
SCNM1-206ENST00000497147 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
SCNM1-206ENST00000497147 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
SCNM1-206ENST00000497147 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
SCNM1-206ENST00000497147 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
SCNM1-206ENST00000497147 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
SCNM1-206ENST00000497147 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
SCNM1-206ENST00000497147 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
SCNM1-206ENST00000497147 K7ERS5 55 aa3.91□□□□□ -1.78
SCNM1-206ENST00000497147 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
SCNM1-206ENST00000497147 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
SCNM1-206ENST00000497147 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
SCNM1-206ENST00000497147 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
SCNM1-206ENST00000497147 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
SCNM1-206ENST00000497147 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
SCNM1-206ENST00000497147 TNP1P09430 55 aa3.8□□□□□ -1.8
SCNM1-206ENST00000497147 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
SCNM1-206ENST00000497147 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
SCNM1-206ENST00000497147 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
SCNM1-206ENST00000497147 MT4P47944 62 aa3.72□□□□□ -1.81
SCNM1-206ENST00000497147 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
SCNM1-206ENST00000497147 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
SCNM1-206ENST00000497147 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
SCNM1-206ENST00000497147 ROMO1P60602 79 aa3.66□□□□□ -1.82
SCNM1-206ENST00000497147 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
SCNM1-206ENST00000497147 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
SCNM1-206ENST00000497147 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
SCNM1-206ENST00000497147 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
SCNM1-206ENST00000497147 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
SCNM1-206ENST00000497147 MT1EP04732 61 aa3.59□□□□□ -1.83
SCNM1-206ENST00000497147 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
SCNM1-206ENST00000497147 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
SCNM1-206ENST00000497147 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
SCNM1-206ENST00000497147 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
SCNM1-206ENST00000497147 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
SCNM1-206ENST00000497147 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
SCNM1-206ENST00000497147 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
SCNM1-206ENST00000497147 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
SCNM1-206ENST00000497147 MT1GP13640 62 aa3.49□□□□□ -1.85
SCNM1-206ENST00000497147 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
SCNM1-206ENST00000497147 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
SCNM1-206ENST00000497147 MT1LQ93083 61 aa3.46□□□□□ -1.86
SCNM1-206ENST00000497147 MT1MQ8N339 61 aa3.4□□□□□ -1.87
SCNM1-206ENST00000497147 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
SCNM1-206ENST00000497147 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
SCNM1-206ENST00000497147 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
SCNM1-206ENST00000497147 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
SCNM1-206ENST00000497147 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
SCNM1-206ENST00000497147 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
SCNM1-206ENST00000497147 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
SCNM1-206ENST00000497147 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
SCNM1-206ENST00000497147 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
SCNM1-206ENST00000497147 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
SCNM1-206ENST00000497147 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
SCNM1-206ENST00000497147 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
SCNM1-206ENST00000497147 MT1AP04731 61 aa2.96□□□□□ -1.94
SCNM1-206ENST00000497147 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
SCNM1-206ENST00000497147 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
SCNM1-206ENST00000497147 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
SCNM1-206ENST00000497147 MT3P25713 68 aa2.85□□□□□ -1.95
SCNM1-206ENST00000497147 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
SCNM1-206ENST00000497147 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
SCNM1-206ENST00000497147 INE1O15225 51 aa2.52□□□□□ -2.01
SCNM1-206ENST00000497147 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
SCNM1-206ENST00000497147 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
SCNM1-206ENST00000497147 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
SCNM1-206ENST00000497147 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
SCNM1-206ENST00000497147 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
SCNM1-206ENST00000497147 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SCNM1-206ENST00000497147 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
SCNM1-206ENST00000497147 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
SCNM1-206ENST00000497147 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
SCNM1-206ENST00000497147 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
SCNM1-206ENST00000497147 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
SCNM1-206ENST00000497147 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
SCNM1-206ENST00000497147 PRM1P04553 51 aa1.89□□□□□ -2.11
SCNM1-206ENST00000497147 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
SCNM1-206ENST00000497147 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 55.7 ms