RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 LCE1AQ5T7P2 110 aa7.97□□□□□ -1.13
C9orf3-222ENST00000496567 PP632Q6XCG6 107 aa7.97□□□□□ -1.13
C9orf3-222ENST00000496567 NEBP20929 6669 aa7.96□□□□□ -1.14
C9orf3-222ENST00000496567 KRTAP12-3P60328 96 aa7.93□□□□□ -1.14
C9orf3-222ENST00000496567 KRTAP19-3Q7Z4W3 81 aa7.84□□□□□ -1.15
C9orf3-222ENST00000496567 SVIPQ8NHG7 77 aa7.81□□□□□ -1.16
C9orf3-222ENST00000496567 MT1LQ93083 61 aa7.78□□□□□ -1.16
C9orf3-222ENST00000496567 LCE5AQ5TCM9 118 aa7.76□□□□□ -1.17
C9orf3-222ENST00000496567 MT1GP13640 62 aa7.74□□□□□ -1.17
C9orf3-222ENST00000496567 SPRR2DP22532 72 aa7.74□□□□□ -1.17
C9orf3-222ENST00000496567 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
C9orf3-222ENST00000496567 MT1MQ8N339 61 aa7.59□□□□□ -1.2
C9orf3-222ENST00000496567 KRTAP20-1Q3LI63 56 aa7.58□□□□□ -1.2
C9orf3-222ENST00000496567 KRTAP19-4Q3LI73 84 aa7.57□□□□□ -1.2
C9orf3-222ENST00000496567 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
C9orf3-222ENST00000496567 KRTAP2-4Q9BYR9 128 aa7.55□□□□□ -1.2
C9orf3-222ENST00000496567 LCE3BQ5TA77 95 aa7.47□□□□□ -1.21
C9orf3-222ENST00000496567 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
C9orf3-222ENST00000496567 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
C9orf3-222ENST00000496567 LCE3CQ5T5A8 94 aa7.37□□□□□ -1.23
C9orf3-222ENST00000496567 KRTAP4-3Q9BYR4 195 aa7.36□□□□□ -1.23
C9orf3-222ENST00000496567 KRTAP2-2Q9BYT5 123 aa7.36□□□□□ -1.23
C9orf3-222ENST00000496567 KRTAP2-1Q9BYU5 128 aa7.36□□□□□ -1.23
C9orf3-222ENST00000496567 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
C9orf3-222ENST00000496567 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
C9orf3-222ENST00000496567 KRTAP9-6A8MVA2 160 aa6.9□□□□□ -1.31
C9orf3-222ENST00000496567 LCE4AQ5TA78 99 aa6.89□□□□□ -1.31
C9orf3-222ENST00000496567 KRTAP5-5Q701N2 237 aaPredicted RBP6.89□□□□□ -1.31
C9orf3-222ENST00000496567 KRTAP5-4Q6L8H1 288 aa6.86□□□□□ -1.31
C9orf3-222ENST00000496567 KRTAP4-9Q9BYQ8 210 aa6.76□□□□□ -1.33
C9orf3-222ENST00000496567 MT4P47944 62 aa6.7□□□□□ -1.34
C9orf3-222ENST00000496567 LCE1DQ5T752 114 aa6.69□□□□□ -1.34
C9orf3-222ENST00000496567 LUZP6Q538Z0 58 aa6.65□□□□□ -1.35
C9orf3-222ENST00000496567 MT1AP04731 61 aa6.63□□□□□ -1.35
C9orf3-222ENST00000496567 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
C9orf3-222ENST00000496567 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
C9orf3-222ENST00000496567 HMCN1Q96RW7 5635 aa6.55□□□□□ -1.36
C9orf3-222ENST00000496567 KRTAP6-1Q3LI64 71 aa6.53□□□□□ -1.36
C9orf3-222ENST00000496567 SYNE1Q8NF91 8797 aaKnown RBP6.5□□□□□ -1.37
C9orf3-222ENST00000496567 KRTAP20-2Q3LI61 65 aa6.44□□□□□ -1.38
C9orf3-222ENST00000496567 NDUFAF8A1L188 74 aa6.4□□□□□ -1.39
C9orf3-222ENST00000496567 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
C9orf3-222ENST00000496567 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
C9orf3-222ENST00000496567 KRTAP6-2Q3LI66 62 aa6.13□□□□□ -1.43
C9orf3-222ENST00000496567 KRTAP5-2Q701N4 177 aa6.12□□□□□ -1.43
C9orf3-222ENST00000496567 AHNAK2Q8IVF2 5795 aa6.06□□□□□ -1.44
C9orf3-222ENST00000496567 MT3P25713 68 aa6.06□□□□□ -1.44
C9orf3-222ENST00000496567 GPR98Q8WXG9 6306 aa5.95□□□□□ -1.46
C9orf3-222ENST00000496567 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
C9orf3-222ENST00000496567 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
C9orf3-222ENST00000496567 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
C9orf3-222ENST00000496567 KRTAP5-7Q6L8G8 165 aa5.57□□□□□ -1.52
C9orf3-222ENST00000496567 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
C9orf3-222ENST00000496567 KRTAP5-8O75690 187 aa5.5□□□□□ -1.53
C9orf3-222ENST00000496567 LCE3DQ9BYE3 92 aa5.45□□□□□ -1.54
C9orf3-222ENST00000496567 LCE1EQ5T753 118 aa5.4□□□□□ -1.55
C9orf3-222ENST00000496567 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
C9orf3-222ENST00000496567 H3BS24 57 aa5.24□□□□□ -1.57
C9orf3-222ENST00000496567 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
C9orf3-222ENST00000496567 INE1O15225 51 aa5.23□□□□□ -1.57
C9orf3-222ENST00000496567 MUC5ACP98088 5654 aa5.2□□□□□ -1.58
C9orf3-222ENST00000496567 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
C9orf3-222ENST00000496567 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
C9orf3-222ENST00000496567 LCE1CQ5T751 118 aa5.01□□□□□ -1.61
C9orf3-222ENST00000496567 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
C9orf3-222ENST00000496567 MUC5BQ9HC84 5762 aaPredicted RBP4.92□□□□□ -1.62
C9orf3-222ENST00000496567 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
C9orf3-222ENST00000496567 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
C9orf3-222ENST00000496567 PRM1P04553 51 aa4.48□□□□□ -1.69
C9orf3-222ENST00000496567 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
C9orf3-222ENST00000496567 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
C9orf3-222ENST00000496567 KRTAP21-2Q3LI59 83 aa4.3□□□□□ -1.72
C9orf3-222ENST00000496567 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
C9orf3-222ENST00000496567 PHGR1C9JFL3 82 aa3.84□□□□□ -1.8
C9orf3-222ENST00000496567 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
C9orf3-222ENST00000496567 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
C9orf3-222ENST00000496567 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
C9orf3-222ENST00000496567 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 152.8 ms