RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
CRNKL1-205ENST00000496549 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
CRNKL1-205ENST00000496549 KRTAP4-7Q9BYR0 210 aa2.63□□□□□ -1.99
CRNKL1-205ENST00000496549 KRTAP9-7A8MTY7 169 aa2.62□□□□□ -1.99
CRNKL1-205ENST00000496549 PRM1P04553 51 aa2.6□□□□□ -1.99
CRNKL1-205ENST00000496549 KMT2DO14686 5537 aa2.59□□□□□ -1.99
CRNKL1-205ENST00000496549 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CRNKL1-205ENST00000496549 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
CRNKL1-205ENST00000496549 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
CRNKL1-205ENST00000496549 KRTAP4-8A0A0G2JLE6 195 aa2.55□□□□□ -2
CRNKL1-205ENST00000496549 KRTAP4-8Q9BYQ9 185 aa2.55□□□□□ -2
CRNKL1-205ENST00000496549 LCE3BQ5TA77 95 aa2.55□□□□□ -2
CRNKL1-205ENST00000496549 MT1LQ93083 61 aa2.54□□□□□ -2
CRNKL1-205ENST00000496549 MT1GP13640 62 aa2.53□□□□□ -2
CRNKL1-205ENST00000496549 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
CRNKL1-205ENST00000496549 LOC100996750A0A140TA64 210 aa2.52□□□□□ -2.01
CRNKL1-205ENST00000496549 KRTAP4-6Q9BYQ5 205 aa2.52□□□□□ -2.01
CRNKL1-205ENST00000496549 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
CRNKL1-205ENST00000496549 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
CRNKL1-205ENST00000496549 MT1EP04732 61 aa2.47□□□□□ -2.01
CRNKL1-205ENST00000496549 KRTAP19-7Q3SYF9 63 aa2.46□□□□□ -2.02
CRNKL1-205ENST00000496549 LCE1AQ5T7P2 110 aa2.43□□□□□ -2.02
CRNKL1-205ENST00000496549 SPRR2FQ96RM1 72 aa2.42□□□□□ -2.02
CRNKL1-205ENST00000496549 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
CRNKL1-205ENST00000496549 KRTAP2-2Q9BYT5 123 aa2.41□□□□□ -2.02
CRNKL1-205ENST00000496549 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
CRNKL1-205ENST00000496549 MT1AP04731 61 aa2.38□□□□□ -2.03
CRNKL1-205ENST00000496549 KRTAP4-9Q9BYQ8 210 aa2.37□□□□□ -2.03
CRNKL1-205ENST00000496549 SPRR2EP22531 72 aa2.34□□□□□ -2.03
CRNKL1-205ENST00000496549 SPRR2BP35325 72 aa2.34□□□□□ -2.03
CRNKL1-205ENST00000496549 SPRR2AP35326 72 aa2.34□□□□□ -2.03
CRNKL1-205ENST00000496549 NEBP20929 6669 aa2.33□□□□□ -2.04
CRNKL1-205ENST00000496549 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
CRNKL1-205ENST00000496549 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
CRNKL1-205ENST00000496549 MT1MQ8N339 61 aa2.3□□□□□ -2.04
CRNKL1-205ENST00000496549 KRTAP19-3Q7Z4W3 81 aa2.3□□□□□ -2.04
CRNKL1-205ENST00000496549 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
CRNKL1-205ENST00000496549 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
CRNKL1-205ENST00000496549 KRTAP20-1Q3LI63 56 aa2.27□□□□□ -2.05
CRNKL1-205ENST00000496549 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
CRNKL1-205ENST00000496549 SPRR2DP22532 72 aa2.25□□□□□ -2.05
CRNKL1-205ENST00000496549 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
CRNKL1-205ENST00000496549 LCE1DQ5T752 114 aa2.19□□□□□ -2.06
CRNKL1-205ENST00000496549 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.07
CRNKL1-205ENST00000496549 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
CRNKL1-205ENST00000496549 MT3P25713 68 aa2.13□□□□□ -2.07
CRNKL1-205ENST00000496549 KRTAP9-9Q9BYP9 154 aa2.09□□□□□ -2.07
CRNKL1-205ENST00000496549 KRTAP9-4Q9BYQ2 154 aa2.09□□□□□ -2.07
CRNKL1-205ENST00000496549 LCE5AQ5TCM9 118 aa2.09□□□□□ -2.08
CRNKL1-205ENST00000496549 MT4P47944 62 aa2.05□□□□□ -2.08
CRNKL1-205ENST00000496549 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
CRNKL1-205ENST00000496549 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
CRNKL1-205ENST00000496549 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
CRNKL1-205ENST00000496549 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
CRNKL1-205ENST00000496549 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
CRNKL1-205ENST00000496549 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
CRNKL1-205ENST00000496549 LCE4AQ5TA78 99 aa1.86□□□□□ -2.11
CRNKL1-205ENST00000496549 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
CRNKL1-205ENST00000496549 KRTAP20-2Q3LI61 65 aa1.8□□□□□ -2.12
CRNKL1-205ENST00000496549 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CRNKL1-205ENST00000496549 KRTAP5-3Q6L8H2 238 aa1.78□□□□□ -2.12
CRNKL1-205ENST00000496549 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
CRNKL1-205ENST00000496549 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
CRNKL1-205ENST00000496549 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
CRNKL1-205ENST00000496549 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
CRNKL1-205ENST00000496549 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.16
CRNKL1-205ENST00000496549 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
CRNKL1-205ENST00000496549 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
CRNKL1-205ENST00000496549 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
CRNKL1-205ENST00000496549 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
CRNKL1-205ENST00000496549 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
CRNKL1-205ENST00000496549 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
CRNKL1-205ENST00000496549 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.4□□□□□ -2.19
CRNKL1-205ENST00000496549 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
CRNKL1-205ENST00000496549 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
CRNKL1-205ENST00000496549 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
CRNKL1-205ENST00000496549 PHGR1C9JFL3 82 aa1.09□□□□□ -2.24
CRNKL1-205ENST00000496549 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms