RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 KMT2DO14686 5537 aa3.24□□□□□ -1.89
HPS4-217ENST00000496385 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
HPS4-217ENST00000496385 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
HPS4-217ENST00000496385 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
HPS4-217ENST00000496385 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
HPS4-217ENST00000496385 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
HPS4-217ENST00000496385 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
HPS4-217ENST00000496385 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
HPS4-217ENST00000496385 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
HPS4-217ENST00000496385 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
HPS4-217ENST00000496385 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
HPS4-217ENST00000496385 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
HPS4-217ENST00000496385 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
HPS4-217ENST00000496385 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
HPS4-217ENST00000496385 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
HPS4-217ENST00000496385 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
HPS4-217ENST00000496385 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
HPS4-217ENST00000496385 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
HPS4-217ENST00000496385 NEBP20929 6669 aa2.97□□□□□ -1.93
HPS4-217ENST00000496385 SPRR2EP22531 72 aa2.96□□□□□ -1.94
HPS4-217ENST00000496385 SPRR2BP35325 72 aa2.96□□□□□ -1.94
HPS4-217ENST00000496385 SPRR2AP35326 72 aa2.96□□□□□ -1.94
HPS4-217ENST00000496385 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
HPS4-217ENST00000496385 LCE1AQ5T7P2 110 aa2.93□□□□□ -1.94
HPS4-217ENST00000496385 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
HPS4-217ENST00000496385 MT1LQ93083 61 aa2.92□□□□□ -1.94
HPS4-217ENST00000496385 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
HPS4-217ENST00000496385 MT1EP04732 61 aa2.9□□□□□ -1.94
HPS4-217ENST00000496385 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
HPS4-217ENST00000496385 SPRR2DP22532 72 aa2.85□□□□□ -1.95
HPS4-217ENST00000496385 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
HPS4-217ENST00000496385 MT1AP04731 61 aa2.77□□□□□ -1.97
HPS4-217ENST00000496385 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
HPS4-217ENST00000496385 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
HPS4-217ENST00000496385 MT1GP13640 62 aa2.75□□□□□ -1.97
HPS4-217ENST00000496385 MT1MQ8N339 61 aa2.74□□□□□ -1.97
HPS4-217ENST00000496385 LOC100996750A0A140TA64 210 aa2.71□□□□□ -1.98
HPS4-217ENST00000496385 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
HPS4-217ENST00000496385 PRM1P04553 51 aa2.67□□□□□ -1.98
HPS4-217ENST00000496385 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
HPS4-217ENST00000496385 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
HPS4-217ENST00000496385 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
HPS4-217ENST00000496385 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
HPS4-217ENST00000496385 KRTAP4-9Q9BYQ8 210 aa2.6□□□□□ -1.99
HPS4-217ENST00000496385 LCE1DQ5T752 114 aa2.57□□□□□ -2
HPS4-217ENST00000496385 MT3P25713 68 aa2.56□□□□□ -2
HPS4-217ENST00000496385 MT4P47944 62 aa2.53□□□□□ -2
HPS4-217ENST00000496385 SYNE1Q8NF91 8797 aaKnown RBP2.51□□□□□ -2.01
HPS4-217ENST00000496385 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
HPS4-217ENST00000496385 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
HPS4-217ENST00000496385 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
HPS4-217ENST00000496385 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
HPS4-217ENST00000496385 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
HPS4-217ENST00000496385 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
HPS4-217ENST00000496385 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
HPS4-217ENST00000496385 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
HPS4-217ENST00000496385 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
HPS4-217ENST00000496385 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
HPS4-217ENST00000496385 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
HPS4-217ENST00000496385 KRTAP5-3Q6L8H2 238 aa2.26□□□□□ -2.05
HPS4-217ENST00000496385 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
HPS4-217ENST00000496385 KRTAP4-11Q9BYQ6 195 aa2.15□□□□□ -2.07
HPS4-217ENST00000496385 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
HPS4-217ENST00000496385 KRTAP5-8O75690 187 aa2.03□□□□□ -2.09
HPS4-217ENST00000496385 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
HPS4-217ENST00000496385 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
HPS4-217ENST00000496385 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
HPS4-217ENST00000496385 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
HPS4-217ENST00000496385 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
HPS4-217ENST00000496385 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
HPS4-217ENST00000496385 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
HPS4-217ENST00000496385 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
HPS4-217ENST00000496385 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
HPS4-217ENST00000496385 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
HPS4-217ENST00000496385 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.16
HPS4-217ENST00000496385 KRTAP4-4Q9BYR3 166 aa1.48□□□□□ -2.17
HPS4-217ENST00000496385 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
HPS4-217ENST00000496385 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 133.6 ms