RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
ERGIC3-219ENST00000496172 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
ERGIC3-219ENST00000496172 TNP1P09430 55 aa3.83□□□□□ -1.8
ERGIC3-219ENST00000496172 MT4P47944 62 aa3.82□□□□□ -1.8
ERGIC3-219ENST00000496172 TMEM258P61165 79 aa3.82□□□□□ -1.8
ERGIC3-219ENST00000496172 V9GYY9 64 aa3.81□□□□□ -1.8
ERGIC3-219ENST00000496172 MT1GP13640 62 aa3.79□□□□□ -1.8
ERGIC3-219ENST00000496172 PP632Q6XCG6 107 aa3.79□□□□□ -1.8
ERGIC3-219ENST00000496172 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
ERGIC3-219ENST00000496172 UQCR11O14957 56 aa3.77□□□□□ -1.81
ERGIC3-219ENST00000496172 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
ERGIC3-219ENST00000496172 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
ERGIC3-219ENST00000496172 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
ERGIC3-219ENST00000496172 MT1LQ93083 61 aa3.72□□□□□ -1.81
ERGIC3-219ENST00000496172 MT1MQ8N339 61 aa3.7□□□□□ -1.82
ERGIC3-219ENST00000496172 MIR22HGQ0VDD5 57 aa3.68□□□□□ -1.82
ERGIC3-219ENST00000496172 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
ERGIC3-219ENST00000496172 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
ERGIC3-219ENST00000496172 K7ERS5 55 aa3.66□□□□□ -1.82
ERGIC3-219ENST00000496172 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
ERGIC3-219ENST00000496172 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
ERGIC3-219ENST00000496172 KRTAP25-1Q3LHN0 102 aa3.61□□□□□ -1.83
ERGIC3-219ENST00000496172 PSPHP1O15172 72 aa3.6□□□□□ -1.83
ERGIC3-219ENST00000496172 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
ERGIC3-219ENST00000496172 Q1T7F1 81 aa3.58□□□□□ -1.84
ERGIC3-219ENST00000496172 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
ERGIC3-219ENST00000496172 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
ERGIC3-219ENST00000496172 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
ERGIC3-219ENST00000496172 A6NED7 52 aa3.5□□□□□ -1.85
ERGIC3-219ENST00000496172 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
ERGIC3-219ENST00000496172 KTN1-AS1Q86SY8 53 aa3.47□□□□□ -1.85
ERGIC3-219ENST00000496172 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
ERGIC3-219ENST00000496172 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
ERGIC3-219ENST00000496172 H3BS24 57 aa3.42□□□□□ -1.86
ERGIC3-219ENST00000496172 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
ERGIC3-219ENST00000496172 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
ERGIC3-219ENST00000496172 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
ERGIC3-219ENST00000496172 ROMO1P60602 79 aa3.37□□□□□ -1.87
ERGIC3-219ENST00000496172 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
ERGIC3-219ENST00000496172 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
ERGIC3-219ENST00000496172 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
ERGIC3-219ENST00000496172 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
ERGIC3-219ENST00000496172 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
ERGIC3-219ENST00000496172 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
ERGIC3-219ENST00000496172 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
ERGIC3-219ENST00000496172 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
ERGIC3-219ENST00000496172 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
ERGIC3-219ENST00000496172 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
ERGIC3-219ENST00000496172 MT1AP04731 61 aa3.17□□□□□ -1.9
ERGIC3-219ENST00000496172 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
ERGIC3-219ENST00000496172 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
ERGIC3-219ENST00000496172 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
ERGIC3-219ENST00000496172 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
ERGIC3-219ENST00000496172 KRTAP9-4Q9BYQ2 154 aa3.08□□□□□ -1.92
ERGIC3-219ENST00000496172 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
ERGIC3-219ENST00000496172 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
ERGIC3-219ENST00000496172 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
ERGIC3-219ENST00000496172 MT3P25713 68 aa2.92□□□□□ -1.94
ERGIC3-219ENST00000496172 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
ERGIC3-219ENST00000496172 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
ERGIC3-219ENST00000496172 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
ERGIC3-219ENST00000496172 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
ERGIC3-219ENST00000496172 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
ERGIC3-219ENST00000496172 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
ERGIC3-219ENST00000496172 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
ERGIC3-219ENST00000496172 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
ERGIC3-219ENST00000496172 INE1O15225 51 aa2.38□□□□□ -2.03
ERGIC3-219ENST00000496172 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
ERGIC3-219ENST00000496172 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
ERGIC3-219ENST00000496172 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
ERGIC3-219ENST00000496172 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
ERGIC3-219ENST00000496172 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
ERGIC3-219ENST00000496172 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
ERGIC3-219ENST00000496172 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
ERGIC3-219ENST00000496172 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
ERGIC3-219ENST00000496172 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
ERGIC3-219ENST00000496172 PRM1P04553 51 aa1.71□□□□□ -2.14
ERGIC3-219ENST00000496172 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 105.4 ms