RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 MT1EP04732 61 aa8.01□□□□□ -1.13
ECHDC3-205ENST00000496136 KRTAP2-3P0C7H8 128 aa8.01□□□□□ -1.13
ECHDC3-205ENST00000496136 KRTAP2-4Q9BYR9 128 aa8.01□□□□□ -1.13
ECHDC3-205ENST00000496136 KRTAP12-3P60328 96 aa7.98□□□□□ -1.13
ECHDC3-205ENST00000496136 LCE1AQ5T7P2 110 aa7.9□□□□□ -1.14
ECHDC3-205ENST00000496136 SPRR2EP22531 72 aa7.88□□□□□ -1.15
ECHDC3-205ENST00000496136 SPRR2BP35325 72 aa7.88□□□□□ -1.15
ECHDC3-205ENST00000496136 SPRR2AP35326 72 aa7.88□□□□□ -1.15
ECHDC3-205ENST00000496136 KRTAP19-3Q7Z4W3 81 aa7.79□□□□□ -1.16
ECHDC3-205ENST00000496136 MT1LQ93083 61 aa7.79□□□□□ -1.16
ECHDC3-205ENST00000496136 LCE5AQ5TCM9 118 aa7.73□□□□□ -1.17
ECHDC3-205ENST00000496136 KRTAP2-2Q9BYT5 123 aa7.73□□□□□ -1.17
ECHDC3-205ENST00000496136 KRTAP2-1Q9BYU5 128 aa7.73□□□□□ -1.17
ECHDC3-205ENST00000496136 KRTAP15-1Q3LI76 137 aa7.71□□□□□ -1.18
ECHDC3-205ENST00000496136 MT1GP13640 62 aa7.7□□□□□ -1.18
ECHDC3-205ENST00000496136 SPRR2DP22532 72 aa7.6□□□□□ -1.19
ECHDC3-205ENST00000496136 MT1MQ8N339 61 aa7.57□□□□□ -1.2
ECHDC3-205ENST00000496136 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
ECHDC3-205ENST00000496136 KRTAP4-7Q9BYR0 210 aa7.49□□□□□ -1.21
ECHDC3-205ENST00000496136 LCE3CQ5T5A8 94 aa7.43□□□□□ -1.22
ECHDC3-205ENST00000496136 LCE3BQ5TA77 95 aa7.43□□□□□ -1.22
ECHDC3-205ENST00000496136 DSTQ03001 7570 aaKnown RBP7.43□□□□□ -1.22
ECHDC3-205ENST00000496136 KRTAP4-3Q9BYR4 195 aa7.41□□□□□ -1.22
ECHDC3-205ENST00000496136 GPR98Q8WXG9 6306 aa7.16□□□□□ -1.26
ECHDC3-205ENST00000496136 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
ECHDC3-205ENST00000496136 KRTAP9-6A8MVA2 160 aa7.03□□□□□ -1.28
ECHDC3-205ENST00000496136 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
ECHDC3-205ENST00000496136 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
ECHDC3-205ENST00000496136 KRTAP5-5Q701N2 237 aaPredicted RBP6.88□□□□□ -1.31
ECHDC3-205ENST00000496136 KRTAP5-4Q6L8H1 288 aa6.8□□□□□ -1.32
ECHDC3-205ENST00000496136 LCE1DQ5T752 114 aa6.77□□□□□ -1.33
ECHDC3-205ENST00000496136 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
ECHDC3-205ENST00000496136 MT4P47944 62 aa6.67□□□□□ -1.34
ECHDC3-205ENST00000496136 HMCN1Q96RW7 5635 aa6.64□□□□□ -1.35
ECHDC3-205ENST00000496136 MT1AP04731 61 aa6.62□□□□□ -1.35
ECHDC3-205ENST00000496136 NDUFAF8A1L188 74 aa6.59□□□□□ -1.35
ECHDC3-205ENST00000496136 KRTAP6-1Q3LI64 71 aa6.57□□□□□ -1.36
ECHDC3-205ENST00000496136 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
ECHDC3-205ENST00000496136 AHNAK2Q8IVF2 5795 aa6.54□□□□□ -1.36
ECHDC3-205ENST00000496136 SYNE1Q8NF91 8797 aaKnown RBP6.53□□□□□ -1.36
ECHDC3-205ENST00000496136 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
ECHDC3-205ENST00000496136 LUZP6Q538Z0 58 aa6.48□□□□□ -1.37
ECHDC3-205ENST00000496136 KRTAP5-10Q6L8G5 202 aa6.48□□□□□ -1.37
ECHDC3-205ENST00000496136 H3BS24 57 aa6.43□□□□□ -1.38
ECHDC3-205ENST00000496136 KRTAP20-2Q3LI61 65 aa6.36□□□□□ -1.39
ECHDC3-205ENST00000496136 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
ECHDC3-205ENST00000496136 KRTAP5-7Q6L8G8 165 aa6.3□□□□□ -1.4
ECHDC3-205ENST00000496136 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
ECHDC3-205ENST00000496136 KRTAP6-2Q3LI66 62 aa6.13□□□□□ -1.43
ECHDC3-205ENST00000496136 KRTAP5-2Q701N4 177 aa6.08□□□□□ -1.44
ECHDC3-205ENST00000496136 MT3P25713 68 aa6.03□□□□□ -1.44
ECHDC3-205ENST00000496136 A0A0A0MQY5 61 aa5.9□□□□□ -1.47
ECHDC3-205ENST00000496136 OBSCNQ5VST9 7968 aa5.75□□□□□ -1.49
ECHDC3-205ENST00000496136 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
ECHDC3-205ENST00000496136 KRTAP5-8O75690 187 aa5.5□□□□□ -1.53
ECHDC3-205ENST00000496136 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
ECHDC3-205ENST00000496136 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
ECHDC3-205ENST00000496136 INE1O15225 51 aa5.47□□□□□ -1.53
ECHDC3-205ENST00000496136 MUC5ACP98088 5654 aa5.45□□□□□ -1.54
ECHDC3-205ENST00000496136 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
ECHDC3-205ENST00000496136 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
ECHDC3-205ENST00000496136 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
ECHDC3-205ENST00000496136 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.56
ECHDC3-205ENST00000496136 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
ECHDC3-205ENST00000496136 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
ECHDC3-205ENST00000496136 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
ECHDC3-205ENST00000496136 LCE1CQ5T751 118 aa4.98□□□□□ -1.61
ECHDC3-205ENST00000496136 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.61□□□□□ -1.67
ECHDC3-205ENST00000496136 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
ECHDC3-205ENST00000496136 PRM1P04553 51 aa4.39□□□□□ -1.71
ECHDC3-205ENST00000496136 KRTAP21-2Q3LI59 83 aa4.32□□□□□ -1.72
ECHDC3-205ENST00000496136 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
ECHDC3-205ENST00000496136 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
ECHDC3-205ENST00000496136 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
ECHDC3-205ENST00000496136 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
ECHDC3-205ENST00000496136 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.85
ECHDC3-205ENST00000496136 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
ECHDC3-205ENST00000496136 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 359.1 ms