RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 KRTAP5-9P26371 169 aa5.83□□□□□ -1.48
HLA-A-208ENST00000496081 MT1LQ93083 61 aa5.83□□□□□ -1.48
HLA-A-208ENST00000496081 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
HLA-A-208ENST00000496081 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
HLA-A-208ENST00000496081 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
HLA-A-208ENST00000496081 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
HLA-A-208ENST00000496081 H3BS24 57 aa5.69□□□□□ -1.5
HLA-A-208ENST00000496081 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
HLA-A-208ENST00000496081 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
HLA-A-208ENST00000496081 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
HLA-A-208ENST00000496081 MT1GP13640 62 aa5.63□□□□□ -1.51
HLA-A-208ENST00000496081 SPRR2EP22531 72 aa5.63□□□□□ -1.51
HLA-A-208ENST00000496081 SPRR2BP35325 72 aa5.63□□□□□ -1.51
HLA-A-208ENST00000496081 SPRR2AP35326 72 aa5.63□□□□□ -1.51
HLA-A-208ENST00000496081 NEBP20929 6669 aa5.61□□□□□ -1.51
HLA-A-208ENST00000496081 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
HLA-A-208ENST00000496081 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
HLA-A-208ENST00000496081 MT1MQ8N339 61 aa5.58□□□□□ -1.52
HLA-A-208ENST00000496081 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
HLA-A-208ENST00000496081 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
HLA-A-208ENST00000496081 SPRR2DP22532 72 aa5.44□□□□□ -1.54
HLA-A-208ENST00000496081 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
HLA-A-208ENST00000496081 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.56
HLA-A-208ENST00000496081 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
HLA-A-208ENST00000496081 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
HLA-A-208ENST00000496081 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
HLA-A-208ENST00000496081 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
HLA-A-208ENST00000496081 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
HLA-A-208ENST00000496081 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.58
HLA-A-208ENST00000496081 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.58
HLA-A-208ENST00000496081 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
HLA-A-208ENST00000496081 INE1O15225 51 aa4.94□□□□□ -1.62
HLA-A-208ENST00000496081 MT1AP04731 61 aa4.93□□□□□ -1.62
HLA-A-208ENST00000496081 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
HLA-A-208ENST00000496081 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
HLA-A-208ENST00000496081 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
HLA-A-208ENST00000496081 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
HLA-A-208ENST00000496081 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
HLA-A-208ENST00000496081 MT4P47944 62 aa4.76□□□□□ -1.65
HLA-A-208ENST00000496081 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
HLA-A-208ENST00000496081 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
HLA-A-208ENST00000496081 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
HLA-A-208ENST00000496081 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
HLA-A-208ENST00000496081 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
HLA-A-208ENST00000496081 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
HLA-A-208ENST00000496081 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
HLA-A-208ENST00000496081 MT3P25713 68 aa4.46□□□□□ -1.7
HLA-A-208ENST00000496081 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
HLA-A-208ENST00000496081 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
HLA-A-208ENST00000496081 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
HLA-A-208ENST00000496081 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
HLA-A-208ENST00000496081 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
HLA-A-208ENST00000496081 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
HLA-A-208ENST00000496081 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
HLA-A-208ENST00000496081 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
HLA-A-208ENST00000496081 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
HLA-A-208ENST00000496081 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
HLA-A-208ENST00000496081 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
HLA-A-208ENST00000496081 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
HLA-A-208ENST00000496081 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.8
HLA-A-208ENST00000496081 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
HLA-A-208ENST00000496081 PRM1P04553 51 aa3.73□□□□□ -1.81
HLA-A-208ENST00000496081 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
HLA-A-208ENST00000496081 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
HLA-A-208ENST00000496081 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
HLA-A-208ENST00000496081 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
HLA-A-208ENST00000496081 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
HLA-A-208ENST00000496081 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
HLA-A-208ENST00000496081 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
HLA-A-208ENST00000496081 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
HLA-A-208ENST00000496081 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
HLA-A-208ENST00000496081 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
HLA-A-208ENST00000496081 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
HLA-A-208ENST00000496081 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
HLA-A-208ENST00000496081 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
HLA-A-208ENST00000496081 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
HLA-A-208ENST00000496081 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
HLA-A-208ENST00000496081 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 90.6 ms