RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 MDN1Q9NU22 5596 aa7.27□□□□□ -1.25
ATG3-208ENST00000495756 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
ATG3-208ENST00000495756 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
ATG3-208ENST00000495756 KRTAP20-1Q3LI63 56 aa7.2□□□□□ -1.26
ATG3-208ENST00000495756 MT1EP04732 61 aa7.18□□□□□ -1.26
ATG3-208ENST00000495756 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
ATG3-208ENST00000495756 KRTAP12-3P60328 96 aa7.12□□□□□ -1.27
ATG3-208ENST00000495756 PRAC1Q96KF2 57 aa7.12□□□□□ -1.27
ATG3-208ENST00000495756 SPRR2EP22531 72 aa7.11□□□□□ -1.27
ATG3-208ENST00000495756 SPRR2BP35325 72 aa7.11□□□□□ -1.27
ATG3-208ENST00000495756 SPRR2AP35326 72 aa7.11□□□□□ -1.27
ATG3-208ENST00000495756 LCE1AQ5T7P2 110 aa7.11□□□□□ -1.27
ATG3-208ENST00000495756 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
ATG3-208ENST00000495756 KRTAP2-3P0C7H8 128 aa7□□□□□ -1.29
ATG3-208ENST00000495756 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
ATG3-208ENST00000495756 KRTAP19-3Q7Z4W3 81 aa6.98□□□□□ -1.29
ATG3-208ENST00000495756 LCE1DQ5T752 114 aa6.98□□□□□ -1.29
ATG3-208ENST00000495756 MT1LQ93083 61 aa6.96□□□□□ -1.3
ATG3-208ENST00000495756 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
ATG3-208ENST00000495756 MT1GP13640 62 aa6.9□□□□□ -1.31
ATG3-208ENST00000495756 SPRR2DP22532 72 aa6.86□□□□□ -1.31
ATG3-208ENST00000495756 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
ATG3-208ENST00000495756 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
ATG3-208ENST00000495756 MT1MQ8N339 61 aa6.79□□□□□ -1.32
ATG3-208ENST00000495756 KRTAP2-2Q9BYT5 123 aa6.78□□□□□ -1.32
ATG3-208ENST00000495756 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
ATG3-208ENST00000495756 KRTAP4-2Q9BYR5 136 aa6.74□□□□□ -1.33
ATG3-208ENST00000495756 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
ATG3-208ENST00000495756 DSTQ03001 7570 aaKnown RBP6.69□□□□□ -1.34
ATG3-208ENST00000495756 KRTAP4-3Q9BYR4 195 aa6.62□□□□□ -1.35
ATG3-208ENST00000495756 LCE3CQ5T5A8 94 aa6.61□□□□□ -1.35
ATG3-208ENST00000495756 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
ATG3-208ENST00000495756 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
ATG3-208ENST00000495756 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
ATG3-208ENST00000495756 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
ATG3-208ENST00000495756 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
ATG3-208ENST00000495756 GPR98Q8WXG9 6306 aa6.15□□□□□ -1.42
ATG3-208ENST00000495756 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
ATG3-208ENST00000495756 KRTAP5-4Q6L8H1 288 aa6.11□□□□□ -1.43
ATG3-208ENST00000495756 MT4P47944 62 aa5.98□□□□□ -1.45
ATG3-208ENST00000495756 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
ATG3-208ENST00000495756 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
ATG3-208ENST00000495756 MT1AP04731 61 aa5.92□□□□□ -1.46
ATG3-208ENST00000495756 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
ATG3-208ENST00000495756 NDUFAF8A1L188 74 aa5.85□□□□□ -1.47
ATG3-208ENST00000495756 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
ATG3-208ENST00000495756 LUZP6Q538Z0 58 aa5.84□□□□□ -1.47
ATG3-208ENST00000495756 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
ATG3-208ENST00000495756 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
ATG3-208ENST00000495756 H3BS24 57 aa5.62□□□□□ -1.51
ATG3-208ENST00000495756 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
ATG3-208ENST00000495756 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
ATG3-208ENST00000495756 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.53
ATG3-208ENST00000495756 MT3P25713 68 aa5.39□□□□□ -1.55
ATG3-208ENST00000495756 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
ATG3-208ENST00000495756 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
ATG3-208ENST00000495756 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
ATG3-208ENST00000495756 INE1O15225 51 aa4.95□□□□□ -1.62
ATG3-208ENST00000495756 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
ATG3-208ENST00000495756 LCE3DQ9BYE3 92 aa4.89□□□□□ -1.63
ATG3-208ENST00000495756 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
ATG3-208ENST00000495756 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
ATG3-208ENST00000495756 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
ATG3-208ENST00000495756 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
ATG3-208ENST00000495756 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
ATG3-208ENST00000495756 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
ATG3-208ENST00000495756 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
ATG3-208ENST00000495756 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
ATG3-208ENST00000495756 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
ATG3-208ENST00000495756 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
ATG3-208ENST00000495756 PRM1P04553 51 aa3.88□□□□□ -1.79
ATG3-208ENST00000495756 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
ATG3-208ENST00000495756 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
ATG3-208ENST00000495756 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
ATG3-208ENST00000495756 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
ATG3-208ENST00000495756 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
ATG3-208ENST00000495756 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
ATG3-208ENST00000495756 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 68.6 ms