RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
ACTN4-207ENST00000495553 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
ACTN4-207ENST00000495553 SPRR2EP22531 72 aa3.6□□□□□ -1.83
ACTN4-207ENST00000495553 SPRR2BP35325 72 aa3.6□□□□□ -1.83
ACTN4-207ENST00000495553 SPRR2AP35326 72 aa3.6□□□□□ -1.83
ACTN4-207ENST00000495553 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
ACTN4-207ENST00000495553 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
ACTN4-207ENST00000495553 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
ACTN4-207ENST00000495553 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
ACTN4-207ENST00000495553 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
ACTN4-207ENST00000495553 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
ACTN4-207ENST00000495553 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
ACTN4-207ENST00000495553 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
ACTN4-207ENST00000495553 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
ACTN4-207ENST00000495553 SPRR2DP22532 72 aa3.48□□□□□ -1.85
ACTN4-207ENST00000495553 MT1EP04732 61 aa3.46□□□□□ -1.86
ACTN4-207ENST00000495553 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
ACTN4-207ENST00000495553 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
ACTN4-207ENST00000495553 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
ACTN4-207ENST00000495553 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
ACTN4-207ENST00000495553 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
ACTN4-207ENST00000495553 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
ACTN4-207ENST00000495553 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
ACTN4-207ENST00000495553 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
ACTN4-207ENST00000495553 MT1LQ93083 61 aa3.37□□□□□ -1.87
ACTN4-207ENST00000495553 MT1GP13640 62 aa3.36□□□□□ -1.87
ACTN4-207ENST00000495553 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
ACTN4-207ENST00000495553 KRTAP2-1Q9BYU5 128 aa3.36□□□□□ -1.87
ACTN4-207ENST00000495553 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
ACTN4-207ENST00000495553 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
ACTN4-207ENST00000495553 MT1MQ8N339 61 aa3.28□□□□□ -1.88
ACTN4-207ENST00000495553 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
ACTN4-207ENST00000495553 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
ACTN4-207ENST00000495553 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
ACTN4-207ENST00000495553 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
ACTN4-207ENST00000495553 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
ACTN4-207ENST00000495553 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
ACTN4-207ENST00000495553 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
ACTN4-207ENST00000495553 MT4P47944 62 aa3.03□□□□□ -1.92
ACTN4-207ENST00000495553 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
ACTN4-207ENST00000495553 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
ACTN4-207ENST00000495553 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
ACTN4-207ENST00000495553 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
ACTN4-207ENST00000495553 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
ACTN4-207ENST00000495553 MT1AP04731 61 aa2.89□□□□□ -1.95
ACTN4-207ENST00000495553 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
ACTN4-207ENST00000495553 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
ACTN4-207ENST00000495553 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
ACTN4-207ENST00000495553 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
ACTN4-207ENST00000495553 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
ACTN4-207ENST00000495553 MT3P25713 68 aa2.67□□□□□ -1.98
ACTN4-207ENST00000495553 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
ACTN4-207ENST00000495553 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
ACTN4-207ENST00000495553 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
ACTN4-207ENST00000495553 H3BS24 57 aa2.64□□□□□ -1.99
ACTN4-207ENST00000495553 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
ACTN4-207ENST00000495553 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
ACTN4-207ENST00000495553 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
ACTN4-207ENST00000495553 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
ACTN4-207ENST00000495553 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
ACTN4-207ENST00000495553 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
ACTN4-207ENST00000495553 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
ACTN4-207ENST00000495553 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
ACTN4-207ENST00000495553 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
ACTN4-207ENST00000495553 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
ACTN4-207ENST00000495553 LCE1EQ5T753 118 aa2.34□□□□□ -2.03
ACTN4-207ENST00000495553 INE1O15225 51 aa2.32□□□□□ -2.04
ACTN4-207ENST00000495553 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
ACTN4-207ENST00000495553 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
ACTN4-207ENST00000495553 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
ACTN4-207ENST00000495553 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
ACTN4-207ENST00000495553 PRM1P04553 51 aa1.95□□□□□ -2.1
ACTN4-207ENST00000495553 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
ACTN4-207ENST00000495553 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
ACTN4-207ENST00000495553 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
ACTN4-207ENST00000495553 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
ACTN4-207ENST00000495553 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
ACTN4-207ENST00000495553 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms