RNA–Protein interactions for RNA: ENST00000495311.1

POLR2B-210, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-210ENST00000495311 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
POLR2B-210ENST00000495311 TNP1P09430 55 aa4.33□□□□□ -1.72
POLR2B-210ENST00000495311 SPRR2DP22532 72 aa4.29□□□□□ -1.72
POLR2B-210ENST00000495311 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
POLR2B-210ENST00000495311 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
POLR2B-210ENST00000495311 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
POLR2B-210ENST00000495311 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
POLR2B-210ENST00000495311 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
POLR2B-210ENST00000495311 ROMO1P60602 79 aa4.18□□□□□ -1.74
POLR2B-210ENST00000495311 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
POLR2B-210ENST00000495311 MT1EP04732 61 aa4.15□□□□□ -1.75
POLR2B-210ENST00000495311 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
POLR2B-210ENST00000495311 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
POLR2B-210ENST00000495311 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
POLR2B-210ENST00000495311 HMCN1Q96RW7 5635 aa4.07□□□□□ -1.76
POLR2B-210ENST00000495311 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
POLR2B-210ENST00000495311 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
POLR2B-210ENST00000495311 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
POLR2B-210ENST00000495311 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
POLR2B-210ENST00000495311 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
POLR2B-210ENST00000495311 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
POLR2B-210ENST00000495311 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
POLR2B-210ENST00000495311 MT1GP13640 62 aa4.02□□□□□ -1.77
POLR2B-210ENST00000495311 MT1LQ93083 61 aa4.02□□□□□ -1.77
POLR2B-210ENST00000495311 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
POLR2B-210ENST00000495311 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
POLR2B-210ENST00000495311 MT1MQ8N339 61 aa3.92□□□□□ -1.78
POLR2B-210ENST00000495311 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
POLR2B-210ENST00000495311 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
POLR2B-210ENST00000495311 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
POLR2B-210ENST00000495311 MT4P47944 62 aa3.8□□□□□ -1.8
POLR2B-210ENST00000495311 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
POLR2B-210ENST00000495311 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
POLR2B-210ENST00000495311 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
POLR2B-210ENST00000495311 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
POLR2B-210ENST00000495311 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
POLR2B-210ENST00000495311 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
POLR2B-210ENST00000495311 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
POLR2B-210ENST00000495311 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
POLR2B-210ENST00000495311 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
POLR2B-210ENST00000495311 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
POLR2B-210ENST00000495311 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
POLR2B-210ENST00000495311 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
POLR2B-210ENST00000495311 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
POLR2B-210ENST00000495311 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
POLR2B-210ENST00000495311 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
POLR2B-210ENST00000495311 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
POLR2B-210ENST00000495311 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
POLR2B-210ENST00000495311 MT1AP04731 61 aa3.43□□□□□ -1.86
POLR2B-210ENST00000495311 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
POLR2B-210ENST00000495311 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
POLR2B-210ENST00000495311 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
POLR2B-210ENST00000495311 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
POLR2B-210ENST00000495311 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
POLR2B-210ENST00000495311 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
POLR2B-210ENST00000495311 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
POLR2B-210ENST00000495311 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
POLR2B-210ENST00000495311 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
POLR2B-210ENST00000495311 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
POLR2B-210ENST00000495311 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
POLR2B-210ENST00000495311 MT3P25713 68 aa3.13□□□□□ -1.91
POLR2B-210ENST00000495311 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
POLR2B-210ENST00000495311 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
POLR2B-210ENST00000495311 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
POLR2B-210ENST00000495311 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
POLR2B-210ENST00000495311 INE1O15225 51 aa2.69□□□□□ -1.98
POLR2B-210ENST00000495311 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
POLR2B-210ENST00000495311 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
POLR2B-210ENST00000495311 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
POLR2B-210ENST00000495311 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
POLR2B-210ENST00000495311 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
POLR2B-210ENST00000495311 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
POLR2B-210ENST00000495311 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
POLR2B-210ENST00000495311 PRM1P04553 51 aa2.13□□□□□ -2.07
POLR2B-210ENST00000495311 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
POLR2B-210ENST00000495311 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
POLR2B-210ENST00000495311 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
POLR2B-210ENST00000495311 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 48.3 ms