RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 MT1EP04732 61 aa5.35□□□□□ -1.55
SCAP-213ENST00000494938 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
SCAP-213ENST00000494938 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
SCAP-213ENST00000494938 UQCR11O14957 56 aa5.29□□□□□ -1.56
SCAP-213ENST00000494938 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
SCAP-213ENST00000494938 TNP1P09430 55 aa5.24□□□□□ -1.57
SCAP-213ENST00000494938 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
SCAP-213ENST00000494938 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
SCAP-213ENST00000494938 Q1T7F1 81 aa5.18□□□□□ -1.58
SCAP-213ENST00000494938 V9GYY9 64 aa5.17□□□□□ -1.58
SCAP-213ENST00000494938 PSPHP1O15172 72 aa5.16□□□□□ -1.58
SCAP-213ENST00000494938 MT1GP13640 62 aa5.16□□□□□ -1.58
SCAP-213ENST00000494938 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
SCAP-213ENST00000494938 MT1LQ93083 61 aa5.13□□□□□ -1.59
SCAP-213ENST00000494938 MT1MQ8N339 61 aa5.07□□□□□ -1.6
SCAP-213ENST00000494938 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
SCAP-213ENST00000494938 K7ERS5 55 aa5.02□□□□□ -1.61
SCAP-213ENST00000494938 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
SCAP-213ENST00000494938 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
SCAP-213ENST00000494938 PCP4P48539 62 aa5.01□□□□□ -1.61
SCAP-213ENST00000494938 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
SCAP-213ENST00000494938 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
SCAP-213ENST00000494938 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
SCAP-213ENST00000494938 A6NED7 52 aa4.96□□□□□ -1.62
SCAP-213ENST00000494938 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
SCAP-213ENST00000494938 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
SCAP-213ENST00000494938 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
SCAP-213ENST00000494938 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
SCAP-213ENST00000494938 MT4P47944 62 aa4.75□□□□□ -1.65
SCAP-213ENST00000494938 ROMO1P60602 79 aa4.75□□□□□ -1.65
SCAP-213ENST00000494938 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
SCAP-213ENST00000494938 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
SCAP-213ENST00000494938 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
SCAP-213ENST00000494938 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
SCAP-213ENST00000494938 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
SCAP-213ENST00000494938 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
SCAP-213ENST00000494938 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
SCAP-213ENST00000494938 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
SCAP-213ENST00000494938 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
SCAP-213ENST00000494938 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
SCAP-213ENST00000494938 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
SCAP-213ENST00000494938 MT1AP04731 61 aa4.35□□□□□ -1.71
SCAP-213ENST00000494938 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
SCAP-213ENST00000494938 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
SCAP-213ENST00000494938 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
SCAP-213ENST00000494938 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
SCAP-213ENST00000494938 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
SCAP-213ENST00000494938 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
SCAP-213ENST00000494938 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
SCAP-213ENST00000494938 MT3P25713 68 aa3.98□□□□□ -1.77
SCAP-213ENST00000494938 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
SCAP-213ENST00000494938 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
SCAP-213ENST00000494938 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
SCAP-213ENST00000494938 PRO0628Q9UI54 55 aa3.86□□□□□ -1.79
SCAP-213ENST00000494938 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
SCAP-213ENST00000494938 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
SCAP-213ENST00000494938 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
SCAP-213ENST00000494938 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
SCAP-213ENST00000494938 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
SCAP-213ENST00000494938 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
SCAP-213ENST00000494938 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
SCAP-213ENST00000494938 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
SCAP-213ENST00000494938 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
SCAP-213ENST00000494938 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
SCAP-213ENST00000494938 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
SCAP-213ENST00000494938 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
SCAP-213ENST00000494938 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
SCAP-213ENST00000494938 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
SCAP-213ENST00000494938 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
SCAP-213ENST00000494938 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
SCAP-213ENST00000494938 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
SCAP-213ENST00000494938 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
SCAP-213ENST00000494938 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
SCAP-213ENST00000494938 PRM1P04553 51 aa2.44□□□□□ -2.02
SCAP-213ENST00000494938 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
SCAP-213ENST00000494938 INE1O15225 51 aa2.17□□□□□ -2.06
SCAP-213ENST00000494938 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SCAP-213ENST00000494938 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 96.6 ms