RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 MT1GP13640 62 aa5.8□□□□□ -1.48
COL4A2-209ENST00000494852 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
COL4A2-209ENST00000494852 A8MU10 97 aa5.78□□□□□ -1.48
COL4A2-209ENST00000494852 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
COL4A2-209ENST00000494852 PRR15LQ9BU68 103 aa5.75□□□□□ -1.49
COL4A2-209ENST00000494852 LINC01558Q9Y6Z2 57 aa5.73□□□□□ -1.49
COL4A2-209ENST00000494852 TMEM258P61165 79 aa5.72□□□□□ -1.49
COL4A2-209ENST00000494852 KRTAP5-4Q6L8H1 288 aa5.7□□□□□ -1.5
COL4A2-209ENST00000494852 KRTAP19-5Q3LI72 72 aa5.68□□□□□ -1.5
COL4A2-209ENST00000494852 MT1MQ8N339 61 aa5.67□□□□□ -1.5
COL4A2-209ENST00000494852 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
COL4A2-209ENST00000494852 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
COL4A2-209ENST00000494852 C10orf95Q9H7T3 257 aa5.62□□□□□ -1.51
COL4A2-209ENST00000494852 MT1LQ93083 61 aa5.59□□□□□ -1.51
COL4A2-209ENST00000494852 TNP1P09430 55 aa5.58□□□□□ -1.52
COL4A2-209ENST00000494852 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
COL4A2-209ENST00000494852 UQCR11O14957 56 aa5.57□□□□□ -1.52
COL4A2-209ENST00000494852 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
COL4A2-209ENST00000494852 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
COL4A2-209ENST00000494852 LCE3AQ5TA76 89 aa5.53□□□□□ -1.52
COL4A2-209ENST00000494852 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
COL4A2-209ENST00000494852 V9GYY9 64 aa5.41□□□□□ -1.54
COL4A2-209ENST00000494852 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
COL4A2-209ENST00000494852 Q1T7F1 81 aa5.38□□□□□ -1.55
COL4A2-209ENST00000494852 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
COL4A2-209ENST00000494852 PSPHP1O15172 72 aa5.37□□□□□ -1.55
COL4A2-209ENST00000494852 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
COL4A2-209ENST00000494852 K7ERS5 55 aa5.32□□□□□ -1.56
COL4A2-209ENST00000494852 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
COL4A2-209ENST00000494852 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
COL4A2-209ENST00000494852 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
COL4A2-209ENST00000494852 A6NED7 52 aa5.18□□□□□ -1.58
COL4A2-209ENST00000494852 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
COL4A2-209ENST00000494852 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
COL4A2-209ENST00000494852 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
COL4A2-209ENST00000494852 PCP4P48539 62 aa5.1□□□□□ -1.59
COL4A2-209ENST00000494852 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
COL4A2-209ENST00000494852 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
COL4A2-209ENST00000494852 H3BS24 57 aa4.99□□□□□ -1.61
COL4A2-209ENST00000494852 ROMO1P60602 79 aa4.98□□□□□ -1.61
COL4A2-209ENST00000494852 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
COL4A2-209ENST00000494852 AHNAKQ09666 5890 aaKnown RBP4.92□□□□□ -1.62
COL4A2-209ENST00000494852 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
COL4A2-209ENST00000494852 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
COL4A2-209ENST00000494852 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.62
COL4A2-209ENST00000494852 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
COL4A2-209ENST00000494852 MT1AP04731 61 aa4.75□□□□□ -1.65
COL4A2-209ENST00000494852 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
COL4A2-209ENST00000494852 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
COL4A2-209ENST00000494852 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
COL4A2-209ENST00000494852 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
COL4A2-209ENST00000494852 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
COL4A2-209ENST00000494852 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
COL4A2-209ENST00000494852 MT3P25713 68 aa4.38□□□□□ -1.71
COL4A2-209ENST00000494852 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
COL4A2-209ENST00000494852 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
COL4A2-209ENST00000494852 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
COL4A2-209ENST00000494852 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
COL4A2-209ENST00000494852 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
COL4A2-209ENST00000494852 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
COL4A2-209ENST00000494852 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
COL4A2-209ENST00000494852 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
COL4A2-209ENST00000494852 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
COL4A2-209ENST00000494852 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
COL4A2-209ENST00000494852 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
COL4A2-209ENST00000494852 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
COL4A2-209ENST00000494852 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
COL4A2-209ENST00000494852 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
COL4A2-209ENST00000494852 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
COL4A2-209ENST00000494852 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
COL4A2-209ENST00000494852 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
COL4A2-209ENST00000494852 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
COL4A2-209ENST00000494852 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
COL4A2-209ENST00000494852 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
COL4A2-209ENST00000494852 PRM1P04553 51 aa2.55□□□□□ -2
COL4A2-209ENST00000494852 INE1O15225 51 aa2.22□□□□□ -2.05
COL4A2-209ENST00000494852 A0A0A0MQY5 61 aa2.16□□□□□ -2.06
COL4A2-209ENST00000494852 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 68.2 ms