RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
APTX-230ENST00000494649 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
APTX-230ENST00000494649 MT1EP04732 61 aa4.12□□□□□ -1.75
APTX-230ENST00000494649 SPRR2DP22532 72 aa4.11□□□□□ -1.75
APTX-230ENST00000494649 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
APTX-230ENST00000494649 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
APTX-230ENST00000494649 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
APTX-230ENST00000494649 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
APTX-230ENST00000494649 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
APTX-230ENST00000494649 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
APTX-230ENST00000494649 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
APTX-230ENST00000494649 LCE3BQ5TA77 95 aa4□□□□□ -1.77
APTX-230ENST00000494649 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
APTX-230ENST00000494649 MT1LQ93083 61 aa3.97□□□□□ -1.77
APTX-230ENST00000494649 ROMO1P60602 79 aa3.96□□□□□ -1.78
APTX-230ENST00000494649 MT1GP13640 62 aa3.93□□□□□ -1.78
APTX-230ENST00000494649 MT1MQ8N339 61 aa3.9□□□□□ -1.78
APTX-230ENST00000494649 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
APTX-230ENST00000494649 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
APTX-230ENST00000494649 H3BS24 57 aa3.88□□□□□ -1.79
APTX-230ENST00000494649 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
APTX-230ENST00000494649 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
APTX-230ENST00000494649 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
APTX-230ENST00000494649 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
APTX-230ENST00000494649 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
APTX-230ENST00000494649 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
APTX-230ENST00000494649 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
APTX-230ENST00000494649 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
APTX-230ENST00000494649 MT4P47944 62 aa3.64□□□□□ -1.83
APTX-230ENST00000494649 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
APTX-230ENST00000494649 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
APTX-230ENST00000494649 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
APTX-230ENST00000494649 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
APTX-230ENST00000494649 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
APTX-230ENST00000494649 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
APTX-230ENST00000494649 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
APTX-230ENST00000494649 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
APTX-230ENST00000494649 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
APTX-230ENST00000494649 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
APTX-230ENST00000494649 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
APTX-230ENST00000494649 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
APTX-230ENST00000494649 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
APTX-230ENST00000494649 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
APTX-230ENST00000494649 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
APTX-230ENST00000494649 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
APTX-230ENST00000494649 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
APTX-230ENST00000494649 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
APTX-230ENST00000494649 MT1AP04731 61 aa3.35□□□□□ -1.87
APTX-230ENST00000494649 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
APTX-230ENST00000494649 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
APTX-230ENST00000494649 NDUFAF8A1L188 74 aa3.21□□□□□ -1.89
APTX-230ENST00000494649 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
APTX-230ENST00000494649 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
APTX-230ENST00000494649 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
APTX-230ENST00000494649 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
APTX-230ENST00000494649 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
APTX-230ENST00000494649 MT3P25713 68 aa3.05□□□□□ -1.92
APTX-230ENST00000494649 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
APTX-230ENST00000494649 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
APTX-230ENST00000494649 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
APTX-230ENST00000494649 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
APTX-230ENST00000494649 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
APTX-230ENST00000494649 INE1O15225 51 aa2.73□□□□□ -1.97
APTX-230ENST00000494649 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
APTX-230ENST00000494649 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
APTX-230ENST00000494649 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
APTX-230ENST00000494649 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
APTX-230ENST00000494649 LCE1CQ5T751 118 aa2.54□□□□□ -2
APTX-230ENST00000494649 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
APTX-230ENST00000494649 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
APTX-230ENST00000494649 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
APTX-230ENST00000494649 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
APTX-230ENST00000494649 PRM1P04553 51 aa2.08□□□□□ -2.08
APTX-230ENST00000494649 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
APTX-230ENST00000494649 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
APTX-230ENST00000494649 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
APTX-230ENST00000494649 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
APTX-230ENST00000494649 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 5.1 ms