RNA–Protein interactions for RNA: ENST00000494607.5

PQLC1-208, Transcript of PQ loop repeat containing 1, human

TSL 3

Gene PQLC1, Length 666 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PQLC1-208	ENST00000494607	LCE3A	Q5TA76	89 aa		5.93	□□□□□ -1.46
PQLC1-208	ENST00000494607	ROMO1	P60602	79 aa		5.91	□□□□□ -1.46
PQLC1-208	ENST00000494607	PMAIP1	Q13794	54 aa		5.9	□□□□□ -1.46
PQLC1-208	ENST00000494607	KRTAP25-1	Q3LHN0	102 aa		5.88	□□□□□ -1.47
PQLC1-208	ENST00000494607	KRTAP19-3	Q7Z4W3	81 aa		5.88	□□□□□ -1.47
PQLC1-208	ENST00000494607	LCE5A	Q5TCM9	118 aa		5.85	□□□□□ -1.47
PQLC1-208	ENST00000494607	KRTAP2-2	Q9BYT5	123 aa		5.82	□□□□□ -1.48
PQLC1-208	ENST00000494607	KRTAP2-1	Q9BYU5	128 aa		5.82	□□□□□ -1.48
PQLC1-208	ENST00000494607	LCE3B	Q5TA77	95 aa		5.81	□□□□□ -1.48
PQLC1-208	ENST00000494607	MT1G	P13640	62 aa		5.78	□□□□□ -1.48
PQLC1-208	ENST00000494607	PP632	Q6XCG6	107 aa		5.77	□□□□□ -1.49
PQLC1-208	ENST00000494607	MT1L	Q93083	61 aa		5.74	□□□□□ -1.49
PQLC1-208	ENST00000494607	KRTAP12-3	P60328	96 aa		5.73	□□□□□ -1.49
PQLC1-208	ENST00000494607	KRTAP23-1	A1A580	65 aa		5.68	□□□□□ -1.5
PQLC1-208	ENST00000494607	MT1M	Q8N339	61 aa		5.66	□□□□□ -1.5
PQLC1-208	ENST00000494607	PRAC1	Q96KF2	57 aa		5.63	□□□□□ -1.51
PQLC1-208	ENST00000494607	KTN1-AS1	Q86SY8	53 aa		5.6	□□□□□ -1.51
PQLC1-208	ENST00000494607	DST	Q03001	7570 aa	Known RBP	5.58	□□□□□ -1.52
PQLC1-208	ENST00000494607	KRTAP19-4	Q3LI73	84 aa		5.49	□□□□□ -1.53
PQLC1-208	ENST00000494607	KRTAP4-3	Q9BYR4	195 aa		5.47	□□□□□ -1.53
PQLC1-208	ENST00000494607	KRTAP15-1	Q3LI76	137 aa		5.44	□□□□□ -1.54
PQLC1-208	ENST00000494607	KRTAP4-7	Q9BYR0	210 aa		5.43	□□□□□ -1.54
PQLC1-208	ENST00000494607	LCE4A	Q5TA78	99 aa		5.34	□□□□□ -1.55
PQLC1-208	ENST00000494607	LCE3C	Q5T5A8	94 aa		5.3	□□□□□ -1.56
PQLC1-208	ENST00000494607	KRTAP4-9	Q9BYQ8	210 aa		5.3	□□□□□ -1.56
PQLC1-208	ENST00000494607	KRTAP5-4	Q6L8H1	288 aa		5.26	□□□□□ -1.57
PQLC1-208	ENST00000494607	LCE1D	Q5T752	114 aa		5.23	□□□□□ -1.57
PQLC1-208	ENST00000494607	MT4	P47944	62 aa		5.2	□□□□□ -1.58
PQLC1-208	ENST00000494607	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.16	□□□□□ -1.58
PQLC1-208	ENST00000494607	LOC100996750	A0A140TA64	210 aa		5.13	□□□□□ -1.59
PQLC1-208	ENST00000494607	HMCN1	Q96RW7	5635 aa		5.12	□□□□□ -1.59
PQLC1-208	ENST00000494607	KRTAP4-6	Q9BYQ5	205 aa		5.06	□□□□□ -1.6
PQLC1-208	ENST00000494607	KRTAP12-4	P60329	112 aa		5.01	□□□□□ -1.61
PQLC1-208	ENST00000494607	SPRR5	A0A1B0GTR4	108 aa		4.98	□□□□□ -1.61
PQLC1-208	ENST00000494607	KRTAP9-6	A8MVA2	160 aa		4.94	□□□□□ -1.62
PQLC1-208	ENST00000494607	KRTAP20-2	Q3LI61	65 aa		4.94	□□□□□ -1.62
PQLC1-208	ENST00000494607	GPR98	Q8WXG9	6306 aa		4.92	□□□□□ -1.62
PQLC1-208	ENST00000494607	MT1A	P04731	61 aa		4.9	□□□□□ -1.63
PQLC1-208	ENST00000494607	KRTAP6-1	Q3LI64	71 aa		4.83	□□□□□ -1.64
PQLC1-208	ENST00000494607	SYNE1	Q8NF91	8797 aa	Known RBP	4.83	□□□□□ -1.64
PQLC1-208	ENST00000494607	AHNAK2	Q8IVF2	5795 aa		4.81	□□□□□ -1.64
PQLC1-208	ENST00000494607	KRTAP5-3	Q6L8H2	238 aa		4.78	□□□□□ -1.64
PQLC1-208	ENST00000494607	KRTAP5-10	Q6L8G5	202 aa		4.73	□□□□□ -1.65
PQLC1-208	ENST00000494607	KRTAP9-4	Q9BYQ2	154 aa		4.7	□□□□□ -1.66
PQLC1-208	ENST00000494607	KRTAP5-2	Q701N4	177 aa		4.65	□□□□□ -1.67
PQLC1-208	ENST00000494607	KRTAP6-2	Q3LI66	62 aa		4.58	□□□□□ -1.68
PQLC1-208	ENST00000494607	KRTAP5-7	Q6L8G8	165 aa		4.53	□□□□□ -1.68
PQLC1-208	ENST00000494607	MT3	P25713	68 aa		4.49	□□□□□ -1.69
PQLC1-208	ENST00000494607	LUZP6	Q538Z0	58 aa		4.49	□□□□□ -1.69
PQLC1-208	ENST00000494607	KRTAP4-11	Q9BYQ6	195 aa		4.45	□□□□□ -1.7
PQLC1-208	ENST00000494607	NDUFAF8	A1L188	74 aa		4.33	□□□□□ -1.72
PQLC1-208	ENST00000494607		A0A0A0MQY5	61 aa		4.29	□□□□□ -1.72
PQLC1-208	ENST00000494607	KRTAP5-8	O75690	187 aa		4.29	□□□□□ -1.72
PQLC1-208	ENST00000494607		H3BS24	57 aa		4.28	□□□□□ -1.72
PQLC1-208	ENST00000494607	OBSCN	Q5VST9	7968 aa		4.23	□□□□□ -1.73
PQLC1-208	ENST00000494607	KRTAP5-1	Q6L8H4	278 aa		4.11	□□□□□ -1.75
PQLC1-208	ENST00000494607	LCE1E	Q5T753	118 aa		4.07	□□□□□ -1.76
PQLC1-208	ENST00000494607	KRTAP9-9	Q9BYP9	154 aa		4.05	□□□□□ -1.76
PQLC1-208	ENST00000494607	MUC5AC	P98088	5654 aa		4.02	□□□□□ -1.77
PQLC1-208	ENST00000494607	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.97	□□□□□ -1.77
PQLC1-208	ENST00000494607	AHNAK	Q09666	5890 aa	Known RBP	3.92	□□□□□ -1.78
PQLC1-208	ENST00000494607	LCE3D	Q9BYE3	92 aa		3.88	□□□□□ -1.79
PQLC1-208	ENST00000494607	LCE1B	Q5T7P3	118 aa		3.78	□□□□□ -1.8
PQLC1-208	ENST00000494607	KRTAP4-2	Q9BYR5	136 aa		3.78	□□□□□ -1.8
PQLC1-208	ENST00000494607	LCE1C	Q5T751	118 aa		3.76	□□□□□ -1.81
PQLC1-208	ENST00000494607	LCE3E	Q5T5B0	92 aa		3.69	□□□□□ -1.82
PQLC1-208	ENST00000494607	INE1	O15225	51 aa		3.5	□□□□□ -1.85
PQLC1-208	ENST00000494607	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.46	□□□□□ -1.86
PQLC1-208	ENST00000494607	KRTAP5-11	Q6L8G4	156 aa		3.39	□□□□□ -1.87
PQLC1-208	ENST00000494607	KRTAP4-12	Q9BQ66	201 aa		3.31	□□□□□ -1.88
PQLC1-208	ENST00000494607	LCE1F	Q5T754	118 aa		3.26	□□□□□ -1.89
PQLC1-208	ENST00000494607	KRTAP21-2	Q3LI59	83 aa		3.18	□□□□□ -1.9
PQLC1-208	ENST00000494607	PRM1	P04553	51 aa		3.1	□□□□□ -1.91
PQLC1-208	ENST00000494607	PHGR1	C9JFL3	82 aa		2.91	□□□□□ -1.94
PQLC1-208	ENST00000494607	KRTAP4-4	Q9BYR3	166 aa		2.85	□□□□□ -1.95
PQLC1-208	ENST00000494607	MUC19	Q7Z5P9	8384 aa		2.61	□□□□□ -1.99
PQLC1-208	ENST00000494607	KRTAP21-1	Q3LI58	79 aa		2.11	□□□□□ -2.07
PQLC1-208	ENST00000494607	MUC16	Q8WXI7	14507 aa		1.83	□□□□□ -2.12

Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms