RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
ERCC3-209ENST00000494464 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
ERCC3-209ENST00000494464 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
ERCC3-209ENST00000494464 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
ERCC3-209ENST00000494464 TNP1P09430 55 aa5.16□□□□□ -1.58
ERCC3-209ENST00000494464 KRTAP9-9Q9BYP9 154 aa5.16□□□□□ -1.58
ERCC3-209ENST00000494464 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
ERCC3-209ENST00000494464 SPRR2DP22532 72 aa5.12□□□□□ -1.59
ERCC3-209ENST00000494464 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
ERCC3-209ENST00000494464 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
ERCC3-209ENST00000494464 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
ERCC3-209ENST00000494464 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
ERCC3-209ENST00000494464 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
ERCC3-209ENST00000494464 MT1EP04732 61 aa4.91□□□□□ -1.62
ERCC3-209ENST00000494464 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
ERCC3-209ENST00000494464 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.63
ERCC3-209ENST00000494464 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
ERCC3-209ENST00000494464 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
ERCC3-209ENST00000494464 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
ERCC3-209ENST00000494464 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
ERCC3-209ENST00000494464 MT1GP13640 62 aa4.76□□□□□ -1.65
ERCC3-209ENST00000494464 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
ERCC3-209ENST00000494464 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
ERCC3-209ENST00000494464 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
ERCC3-209ENST00000494464 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
ERCC3-209ENST00000494464 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
ERCC3-209ENST00000494464 MT1LQ93083 61 aa4.69□□□□□ -1.66
ERCC3-209ENST00000494464 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
ERCC3-209ENST00000494464 MT1MQ8N339 61 aa4.68□□□□□ -1.66
ERCC3-209ENST00000494464 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
ERCC3-209ENST00000494464 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
ERCC3-209ENST00000494464 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
ERCC3-209ENST00000494464 H3BS24 57 aa4.53□□□□□ -1.68
ERCC3-209ENST00000494464 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.69
ERCC3-209ENST00000494464 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
ERCC3-209ENST00000494464 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
ERCC3-209ENST00000494464 MT4P47944 62 aa4.45□□□□□ -1.7
ERCC3-209ENST00000494464 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
ERCC3-209ENST00000494464 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
ERCC3-209ENST00000494464 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.7
ERCC3-209ENST00000494464 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
ERCC3-209ENST00000494464 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
ERCC3-209ENST00000494464 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
ERCC3-209ENST00000494464 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
ERCC3-209ENST00000494464 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
ERCC3-209ENST00000494464 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
ERCC3-209ENST00000494464 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
ERCC3-209ENST00000494464 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.74
ERCC3-209ENST00000494464 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
ERCC3-209ENST00000494464 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
ERCC3-209ENST00000494464 MT1AP04731 61 aa4.01□□□□□ -1.77
ERCC3-209ENST00000494464 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
ERCC3-209ENST00000494464 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
ERCC3-209ENST00000494464 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
ERCC3-209ENST00000494464 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
ERCC3-209ENST00000494464 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
ERCC3-209ENST00000494464 INE1O15225 51 aa3.68□□□□□ -1.82
ERCC3-209ENST00000494464 MT3P25713 68 aa3.65□□□□□ -1.82
ERCC3-209ENST00000494464 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
ERCC3-209ENST00000494464 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
ERCC3-209ENST00000494464 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
ERCC3-209ENST00000494464 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
ERCC3-209ENST00000494464 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
ERCC3-209ENST00000494464 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
ERCC3-209ENST00000494464 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
ERCC3-209ENST00000494464 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
ERCC3-209ENST00000494464 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
ERCC3-209ENST00000494464 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
ERCC3-209ENST00000494464 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
ERCC3-209ENST00000494464 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
ERCC3-209ENST00000494464 PRM1P04553 51 aa2.87□□□□□ -1.95
ERCC3-209ENST00000494464 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
ERCC3-209ENST00000494464 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
ERCC3-209ENST00000494464 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
ERCC3-209ENST00000494464 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
ERCC3-209ENST00000494464 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
ERCC3-209ENST00000494464 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
ERCC3-209ENST00000494464 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 37.4 ms