RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
MSH5-217ENST00000494458 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
MSH5-217ENST00000494458 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
MSH5-217ENST00000494458 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
MSH5-217ENST00000494458 TNP1P09430 55 aa2.74□□□□□ -1.97
MSH5-217ENST00000494458 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
MSH5-217ENST00000494458 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
MSH5-217ENST00000494458 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
MSH5-217ENST00000494458 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
MSH5-217ENST00000494458 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
MSH5-217ENST00000494458 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
MSH5-217ENST00000494458 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
MSH5-217ENST00000494458 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
MSH5-217ENST00000494458 FSIP2Q5CZC0 6907 aa2.56□□□□□ -2
MSH5-217ENST00000494458 KRTAP12-3P60328 96 aa2.54□□□□□ -2
MSH5-217ENST00000494458 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
MSH5-217ENST00000494458 CRCT1Q9UGL9 99 aa2.54□□□□□ -2
MSH5-217ENST00000494458 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
MSH5-217ENST00000494458 KMT2DO14686 5537 aa2.52□□□□□ -2.01
MSH5-217ENST00000494458 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
MSH5-217ENST00000494458 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
MSH5-217ENST00000494458 MT1EP04732 61 aa2.48□□□□□ -2.01
MSH5-217ENST00000494458 MT1LQ93083 61 aa2.43□□□□□ -2.02
MSH5-217ENST00000494458 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
MSH5-217ENST00000494458 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
MSH5-217ENST00000494458 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
MSH5-217ENST00000494458 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
MSH5-217ENST00000494458 MT1GP13640 62 aa2.37□□□□□ -2.03
MSH5-217ENST00000494458 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
MSH5-217ENST00000494458 KRTAP6-3Q3LI67 103 aa2.35□□□□□ -2.03
MSH5-217ENST00000494458 SPRR2FQ96RM1 72 aa2.34□□□□□ -2.03
MSH5-217ENST00000494458 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
MSH5-217ENST00000494458 MT1MQ8N339 61 aa2.32□□□□□ -2.04
MSH5-217ENST00000494458 A0A0A0MQY5 61 aa2.3□□□□□ -2.04
MSH5-217ENST00000494458 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
MSH5-217ENST00000494458 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
MSH5-217ENST00000494458 MT3P25713 68 aa2.25□□□□□ -2.05
MSH5-217ENST00000494458 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
MSH5-217ENST00000494458 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
MSH5-217ENST00000494458 SPRR2EP22531 72 aa2.21□□□□□ -2.06
MSH5-217ENST00000494458 SPRR2BP35325 72 aa2.21□□□□□ -2.06
MSH5-217ENST00000494458 SPRR2AP35326 72 aa2.21□□□□□ -2.06
MSH5-217ENST00000494458 KRTAP2-3P0C7H8 128 aa2.15□□□□□ -2.07
MSH5-217ENST00000494458 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
MSH5-217ENST00000494458 KRTAP2-4Q9BYR9 128 aa2.15□□□□□ -2.07
MSH5-217ENST00000494458 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.07
MSH5-217ENST00000494458 DSTQ03001 7570 aaKnown RBP2.14□□□□□ -2.07
MSH5-217ENST00000494458 NEBP20929 6669 aa2.14□□□□□ -2.07
MSH5-217ENST00000494458 SPRR2DP22532 72 aa2.13□□□□□ -2.07
MSH5-217ENST00000494458 MT1AP04731 61 aa2.07□□□□□ -2.08
MSH5-217ENST00000494458 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
MSH5-217ENST00000494458 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
MSH5-217ENST00000494458 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
MSH5-217ENST00000494458 SYNE1Q8NF91 8797 aaKnown RBP1.99□□□□□ -2.09
MSH5-217ENST00000494458 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
MSH5-217ENST00000494458 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
MSH5-217ENST00000494458 INE1O15225 51 aa1.89□□□□□ -2.11
MSH5-217ENST00000494458 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
MSH5-217ENST00000494458 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
MSH5-217ENST00000494458 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
MSH5-217ENST00000494458 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
MSH5-217ENST00000494458 MT4P47944 62 aa1.82□□□□□ -2.12
MSH5-217ENST00000494458 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
MSH5-217ENST00000494458 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
MSH5-217ENST00000494458 LCE3EQ5T5B0 92 aa1.77□□□□□ -2.13
MSH5-217ENST00000494458 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
MSH5-217ENST00000494458 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
MSH5-217ENST00000494458 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
MSH5-217ENST00000494458 GPR98Q8WXG9 6306 aa1.59□□□□□ -2.16
MSH5-217ENST00000494458 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
MSH5-217ENST00000494458 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
MSH5-217ENST00000494458 PRM1P04553 51 aa1.49□□□□□ -2.17
MSH5-217ENST00000494458 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
MSH5-217ENST00000494458 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
MSH5-217ENST00000494458 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
MSH5-217ENST00000494458 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
MSH5-217ENST00000494458 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
MSH5-217ENST00000494458 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 1393.5 ms