RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
LINC02008-202ENST00000494340 COX7CP15954 63 aa3.47□□□□□ -1.85
LINC02008-202ENST00000494340 SMIM26A0A096LP01 95 aa3.46□□□□□ -1.86
LINC02008-202ENST00000494340 MT1MQ8N339 61 aa3.45□□□□□ -1.86
LINC02008-202ENST00000494340 H7BZZ5 65 aa3.44□□□□□ -1.86
LINC02008-202ENST00000494340 MT1LQ93083 61 aa3.44□□□□□ -1.86
LINC02008-202ENST00000494340 A0A1B0GU69 56 aa3.42□□□□□ -1.86
LINC02008-202ENST00000494340 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
LINC02008-202ENST00000494340 TNP1P09430 55 aa3.4□□□□□ -1.87
LINC02008-202ENST00000494340 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
LINC02008-202ENST00000494340 MT4P47944 62 aa3.37□□□□□ -1.87
LINC02008-202ENST00000494340 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
LINC02008-202ENST00000494340 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
LINC02008-202ENST00000494340 A8MU10 97 aa3.35□□□□□ -1.87
LINC02008-202ENST00000494340 PCP4P48539 62 aa3.35□□□□□ -1.87
LINC02008-202ENST00000494340 PRR15LQ9BU68 103 aa3.31□□□□□ -1.88
LINC02008-202ENST00000494340 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
LINC02008-202ENST00000494340 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
LINC02008-202ENST00000494340 ATP5EP56381 51 aaPredicted RBP3.27□□□□□ -1.89
LINC02008-202ENST00000494340 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
LINC02008-202ENST00000494340 ANAPC13Q9BS18 74 aa3.25□□□□□ -1.89
LINC02008-202ENST00000494340 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
LINC02008-202ENST00000494340 LINC01558Q9Y6Z2 57 aa3.24□□□□□ -1.89
LINC02008-202ENST00000494340 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
LINC02008-202ENST00000494340 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
LINC02008-202ENST00000494340 UQCR11O14957 56 aa3.19□□□□□ -1.9
LINC02008-202ENST00000494340 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
LINC02008-202ENST00000494340 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
LINC02008-202ENST00000494340 CCDC179H3BU77 68 aa3.17□□□□□ -1.9
LINC02008-202ENST00000494340 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
LINC02008-202ENST00000494340 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
LINC02008-202ENST00000494340 TMEM258P61165 79 aa3.11□□□□□ -1.91
LINC02008-202ENST00000494340 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
LINC02008-202ENST00000494340 K7ERS5 55 aa3.08□□□□□ -1.92
LINC02008-202ENST00000494340 MIR22HGQ0VDD5 57 aa3.08□□□□□ -1.92
LINC02008-202ENST00000494340 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
LINC02008-202ENST00000494340 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
LINC02008-202ENST00000494340 V9GYY9 64 aa3□□□□□ -1.93
LINC02008-202ENST00000494340 MT1AP04731 61 aa2.95□□□□□ -1.94
LINC02008-202ENST00000494340 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
LINC02008-202ENST00000494340 Q1T7F1 81 aa2.94□□□□□ -1.94
LINC02008-202ENST00000494340 PSPHP1O15172 72 aa2.92□□□□□ -1.94
LINC02008-202ENST00000494340 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
LINC02008-202ENST00000494340 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
LINC02008-202ENST00000494340 CDC42SE1Q9NRR8 79 aa2.88□□□□□ -1.95
LINC02008-202ENST00000494340 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
LINC02008-202ENST00000494340 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
LINC02008-202ENST00000494340 A6NED7 52 aa2.84□□□□□ -1.95
LINC02008-202ENST00000494340 RPS28P62857 69 aaKnown RBP2.84□□□□□ -1.95
LINC02008-202ENST00000494340 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
LINC02008-202ENST00000494340 MT3P25713 68 aa2.83□□□□□ -1.96
LINC02008-202ENST00000494340 ROMO1P60602 79 aa2.82□□□□□ -1.96
LINC02008-202ENST00000494340 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
LINC02008-202ENST00000494340 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
LINC02008-202ENST00000494340 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
LINC02008-202ENST00000494340 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
LINC02008-202ENST00000494340 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
LINC02008-202ENST00000494340 PRAC1Q96KF2 57 aa2.7□□□□□ -1.98
LINC02008-202ENST00000494340 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
LINC02008-202ENST00000494340 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
LINC02008-202ENST00000494340 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
LINC02008-202ENST00000494340 PRO0628Q9UI54 55 aa2.39□□□□□ -2.03
LINC02008-202ENST00000494340 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
LINC02008-202ENST00000494340 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
LINC02008-202ENST00000494340 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
LINC02008-202ENST00000494340 NDUFAF8A1L188 74 aa2.32□□□□□ -2.04
LINC02008-202ENST00000494340 BRK1Q8WUW1 75 aa2.27□□□□□ -2.05
LINC02008-202ENST00000494340 LUZP6Q538Z0 58 aa2.26□□□□□ -2.05
LINC02008-202ENST00000494340 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
LINC02008-202ENST00000494340 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
LINC02008-202ENST00000494340 KTN1-AS1Q86SY8 53 aa2.13□□□□□ -2.07
LINC02008-202ENST00000494340 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
LINC02008-202ENST00000494340 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
LINC02008-202ENST00000494340 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
LINC02008-202ENST00000494340 INE1O15225 51 aa1.52□□□□□ -2.17
LINC02008-202ENST00000494340 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
LINC02008-202ENST00000494340 PRM1P04553 51 aa1.41□□□□□ -2.18
LINC02008-202ENST00000494340 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 86.4 ms