RNA–Protein interactions for RNA: ENST00000494089.1

HS6ST1-204, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

TSL 2

Gene HS6ST1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-204ENST00000494089 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.42
HS6ST1-204ENST00000494089 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
HS6ST1-204ENST00000494089 A0A1B0GU33 70 aa6.13□□□□□ -1.43
HS6ST1-204ENST00000494089 PRR15LQ9BU68 103 aa6.13□□□□□ -1.43
HS6ST1-204ENST00000494089 KRTAP4-3Q9BYR4 195 aa6.1□□□□□ -1.43
HS6ST1-204ENST00000494089 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
HS6ST1-204ENST00000494089 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
HS6ST1-204ENST00000494089 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
HS6ST1-204ENST00000494089 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
HS6ST1-204ENST00000494089 V9GYY9 64 aa6.03□□□□□ -1.44
HS6ST1-204ENST00000494089 SMIM26A0A096LP01 95 aa6.02□□□□□ -1.45
HS6ST1-204ENST00000494089 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
HS6ST1-204ENST00000494089 KRTAP20-2Q3LI61 65 aa6.01□□□□□ -1.45
HS6ST1-204ENST00000494089 Q1T7F1 81 aa6□□□□□ -1.45
HS6ST1-204ENST00000494089 TNP1P09430 55 aa5.99□□□□□ -1.45
HS6ST1-204ENST00000494089 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
HS6ST1-204ENST00000494089 PSPHP1O15172 72 aa5.94□□□□□ -1.46
HS6ST1-204ENST00000494089 UQCR11O14957 56 aa5.93□□□□□ -1.46
HS6ST1-204ENST00000494089 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
HS6ST1-204ENST00000494089 A8MU10 97 aa5.9□□□□□ -1.46
HS6ST1-204ENST00000494089 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
HS6ST1-204ENST00000494089 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
HS6ST1-204ENST00000494089 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
HS6ST1-204ENST00000494089 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
HS6ST1-204ENST00000494089 A6NED7 52 aa5.77□□□□□ -1.49
HS6ST1-204ENST00000494089 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
HS6ST1-204ENST00000494089 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
HS6ST1-204ENST00000494089 K7ERS5 55 aa5.65□□□□□ -1.5
HS6ST1-204ENST00000494089 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
HS6ST1-204ENST00000494089 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.51
HS6ST1-204ENST00000494089 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
HS6ST1-204ENST00000494089 KRTAP5-2Q701N4 177 aa5.5□□□□□ -1.53
HS6ST1-204ENST00000494089 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
HS6ST1-204ENST00000494089 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
HS6ST1-204ENST00000494089 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
HS6ST1-204ENST00000494089 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
HS6ST1-204ENST00000494089 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
HS6ST1-204ENST00000494089 MT1AP04731 61 aa5.36□□□□□ -1.55
HS6ST1-204ENST00000494089 MUC5BQ9HC84 5762 aaPredicted RBP5.34□□□□□ -1.55
HS6ST1-204ENST00000494089 ROMO1P60602 79 aa5.33□□□□□ -1.56
HS6ST1-204ENST00000494089 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
HS6ST1-204ENST00000494089 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
HS6ST1-204ENST00000494089 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
HS6ST1-204ENST00000494089 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
HS6ST1-204ENST00000494089 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
HS6ST1-204ENST00000494089 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
HS6ST1-204ENST00000494089 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
HS6ST1-204ENST00000494089 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
HS6ST1-204ENST00000494089 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
HS6ST1-204ENST00000494089 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
HS6ST1-204ENST00000494089 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
HS6ST1-204ENST00000494089 MT3P25713 68 aa4.97□□□□□ -1.61
HS6ST1-204ENST00000494089 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
HS6ST1-204ENST00000494089 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
HS6ST1-204ENST00000494089 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
HS6ST1-204ENST00000494089 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
HS6ST1-204ENST00000494089 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
HS6ST1-204ENST00000494089 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
HS6ST1-204ENST00000494089 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
HS6ST1-204ENST00000494089 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
HS6ST1-204ENST00000494089 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
HS6ST1-204ENST00000494089 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
HS6ST1-204ENST00000494089 LUZP6Q538Z0 58 aa4□□□□□ -1.77
HS6ST1-204ENST00000494089 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
HS6ST1-204ENST00000494089 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
HS6ST1-204ENST00000494089 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
HS6ST1-204ENST00000494089 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
HS6ST1-204ENST00000494089 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
HS6ST1-204ENST00000494089 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
HS6ST1-204ENST00000494089 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
HS6ST1-204ENST00000494089 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
HS6ST1-204ENST00000494089 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
HS6ST1-204ENST00000494089 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
HS6ST1-204ENST00000494089 INE1O15225 51 aa2.96□□□□□ -1.94
HS6ST1-204ENST00000494089 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
HS6ST1-204ENST00000494089 PRM1P04553 51 aa2.75□□□□□ -1.97
HS6ST1-204ENST00000494089 H3BS24 57 aa2.47□□□□□ -2.01
HS6ST1-204ENST00000494089 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms