RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 SPRR2EP22531 72 aa6.77□□□□□ -1.33
NECTIN3-211ENST00000493615 SPRR2BP35325 72 aa6.77□□□□□ -1.33
NECTIN3-211ENST00000493615 SPRR2AP35326 72 aa6.77□□□□□ -1.33
NECTIN3-211ENST00000493615 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
NECTIN3-211ENST00000493615 MT1LQ93083 61 aa6.73□□□□□ -1.33
NECTIN3-211ENST00000493615 NEBP20929 6669 aa6.67□□□□□ -1.34
NECTIN3-211ENST00000493615 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
NECTIN3-211ENST00000493615 KRTAP4-7Q9BYR0 210 aa6.56□□□□□ -1.36
NECTIN3-211ENST00000493615 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
NECTIN3-211ENST00000493615 MT1GP13640 62 aa6.54□□□□□ -1.36
NECTIN3-211ENST00000493615 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
NECTIN3-211ENST00000493615 SPRR2DP22532 72 aa6.53□□□□□ -1.36
NECTIN3-211ENST00000493615 MT1MQ8N339 61 aa6.49□□□□□ -1.37
NECTIN3-211ENST00000493615 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
NECTIN3-211ENST00000493615 KRTAP20-1Q3LI63 56 aa6.44□□□□□ -1.38
NECTIN3-211ENST00000493615 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
NECTIN3-211ENST00000493615 H3BS24 57 aa6.42□□□□□ -1.38
NECTIN3-211ENST00000493615 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
NECTIN3-211ENST00000493615 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
NECTIN3-211ENST00000493615 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
NECTIN3-211ENST00000493615 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
NECTIN3-211ENST00000493615 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
NECTIN3-211ENST00000493615 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
NECTIN3-211ENST00000493615 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
NECTIN3-211ENST00000493615 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
NECTIN3-211ENST00000493615 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
NECTIN3-211ENST00000493615 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
NECTIN3-211ENST00000493615 LUZP6Q538Z0 58 aa6.14□□□□□ -1.43
NECTIN3-211ENST00000493615 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
NECTIN3-211ENST00000493615 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
NECTIN3-211ENST00000493615 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
NECTIN3-211ENST00000493615 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
NECTIN3-211ENST00000493615 MT4P47944 62 aa5.71□□□□□ -1.5
NECTIN3-211ENST00000493615 MT1AP04731 61 aa5.69□□□□□ -1.5
NECTIN3-211ENST00000493615 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
NECTIN3-211ENST00000493615 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
NECTIN3-211ENST00000493615 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
NECTIN3-211ENST00000493615 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
NECTIN3-211ENST00000493615 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
NECTIN3-211ENST00000493615 A0A0A0MQY5 61 aa5.5□□□□□ -1.53
NECTIN3-211ENST00000493615 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
NECTIN3-211ENST00000493615 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
NECTIN3-211ENST00000493615 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
NECTIN3-211ENST00000493615 KRTAP6-2Q3LI66 62 aa5.26□□□□□ -1.57
NECTIN3-211ENST00000493615 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
NECTIN3-211ENST00000493615 MT3P25713 68 aa5.15□□□□□ -1.58
NECTIN3-211ENST00000493615 INE1O15225 51 aa5.12□□□□□ -1.59
NECTIN3-211ENST00000493615 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
NECTIN3-211ENST00000493615 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
NECTIN3-211ENST00000493615 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
NECTIN3-211ENST00000493615 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
NECTIN3-211ENST00000493615 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
NECTIN3-211ENST00000493615 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
NECTIN3-211ENST00000493615 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
NECTIN3-211ENST00000493615 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
NECTIN3-211ENST00000493615 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
NECTIN3-211ENST00000493615 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
NECTIN3-211ENST00000493615 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
NECTIN3-211ENST00000493615 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
NECTIN3-211ENST00000493615 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
NECTIN3-211ENST00000493615 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
NECTIN3-211ENST00000493615 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
NECTIN3-211ENST00000493615 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
NECTIN3-211ENST00000493615 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
NECTIN3-211ENST00000493615 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
NECTIN3-211ENST00000493615 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
NECTIN3-211ENST00000493615 PRM1P04553 51 aa4.07□□□□□ -1.76
NECTIN3-211ENST00000493615 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
NECTIN3-211ENST00000493615 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
NECTIN3-211ENST00000493615 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
NECTIN3-211ENST00000493615 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
NECTIN3-211ENST00000493615 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
NECTIN3-211ENST00000493615 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
NECTIN3-211ENST00000493615 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
NECTIN3-211ENST00000493615 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
NECTIN3-211ENST00000493615 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
NECTIN3-211ENST00000493615 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 67.6 ms