RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
EWSR1-220ENST00000493426 MT1HP80294 61 aa2.6□□□□□ -1.99
EWSR1-220ENST00000493426 M0R2T5 61 aa2.56□□□□□ -2
EWSR1-220ENST00000493426 FSIP2Q5CZC0 6907 aa2.56□□□□□ -2
EWSR1-220ENST00000493426 MT1XP80297 61 aa2.55□□□□□ -2
EWSR1-220ENST00000493426 MT2AP02795 61 aa2.54□□□□□ -2
EWSR1-220ENST00000493426 MT1BP07438 61 aa2.53□□□□□ -2
EWSR1-220ENST00000493426 KRTAP10-7P60409 375 aaPredicted RBP2.53□□□□□ -2
EWSR1-220ENST00000493426 MT1FP04733 61 aa2.51□□□□□ -2.01
EWSR1-220ENST00000493426 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
EWSR1-220ENST00000493426 LCE3CQ5T5A8 94 aa2.51□□□□□ -2.01
EWSR1-220ENST00000493426 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
EWSR1-220ENST00000493426 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
EWSR1-220ENST00000493426 CRCT1Q9UGL9 99 aa2.51□□□□□ -2.01
EWSR1-220ENST00000493426 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
EWSR1-220ENST00000493426 USH2AO75445 5202 aa2.45□□□□□ -2.02
EWSR1-220ENST00000493426 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
EWSR1-220ENST00000493426 KRTAP19-5Q3LI72 72 aa2.4□□□□□ -2.03
EWSR1-220ENST00000493426 KRTAP9-6A8MVA2 160 aa2.38□□□□□ -2.03
EWSR1-220ENST00000493426 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
EWSR1-220ENST00000493426 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
EWSR1-220ENST00000493426 KRTAP19-6Q3LI70 58 aa2.33□□□□□ -2.04
EWSR1-220ENST00000493426 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
EWSR1-220ENST00000493426 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
EWSR1-220ENST00000493426 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
EWSR1-220ENST00000493426 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
EWSR1-220ENST00000493426 SYNE2Q8WXH0 6885 aaKnown RBP2.26□□□□□ -2.05
EWSR1-220ENST00000493426 MT1EP04732 61 aa2.24□□□□□ -2.05
EWSR1-220ENST00000493426 MT1LQ93083 61 aa2.24□□□□□ -2.05
EWSR1-220ENST00000493426 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
EWSR1-220ENST00000493426 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
EWSR1-220ENST00000493426 NEBP20929 6669 aa2.15□□□□□ -2.07
EWSR1-220ENST00000493426 KRTAP5-9P26371 169 aa2.13□□□□□ -2.07
EWSR1-220ENST00000493426 KMT2DO14686 5537 aa2.11□□□□□ -2.07
EWSR1-220ENST00000493426 MT1AP04731 61 aa2.11□□□□□ -2.07
EWSR1-220ENST00000493426 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
EWSR1-220ENST00000493426 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
EWSR1-220ENST00000493426 MT1GP13640 62 aa2.07□□□□□ -2.08
EWSR1-220ENST00000493426 MT1MQ8N339 61 aa2.03□□□□□ -2.08
EWSR1-220ENST00000493426 KRTAP20-1Q3LI63 56 aa2.02□□□□□ -2.09
EWSR1-220ENST00000493426 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
EWSR1-220ENST00000493426 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
EWSR1-220ENST00000493426 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
EWSR1-220ENST00000493426 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
EWSR1-220ENST00000493426 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
EWSR1-220ENST00000493426 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
EWSR1-220ENST00000493426 SPRR2EP22531 72 aa1.96□□□□□ -2.1
EWSR1-220ENST00000493426 SPRR2BP35325 72 aa1.96□□□□□ -2.1
EWSR1-220ENST00000493426 SPRR2AP35326 72 aa1.96□□□□□ -2.1
EWSR1-220ENST00000493426 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
EWSR1-220ENST00000493426 PRM1P04553 51 aa1.92□□□□□ -2.1
EWSR1-220ENST00000493426 KRTAP5-4Q6L8H1 288 aa1.92□□□□□ -2.1
EWSR1-220ENST00000493426 SPRR2DP22532 72 aa1.9□□□□□ -2.11
EWSR1-220ENST00000493426 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
EWSR1-220ENST00000493426 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
EWSR1-220ENST00000493426 KRTAP6-1Q3LI64 71 aa1.85□□□□□ -2.11
EWSR1-220ENST00000493426 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
EWSR1-220ENST00000493426 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.11
EWSR1-220ENST00000493426 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
EWSR1-220ENST00000493426 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
EWSR1-220ENST00000493426 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
EWSR1-220ENST00000493426 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
EWSR1-220ENST00000493426 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
EWSR1-220ENST00000493426 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
EWSR1-220ENST00000493426 MT4P47944 62 aa1.63□□□□□ -2.15
EWSR1-220ENST00000493426 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
EWSR1-220ENST00000493426 KRTAP20-2Q3LI61 65 aa1.59□□□□□ -2.15
EWSR1-220ENST00000493426 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
EWSR1-220ENST00000493426 KRTAP5-2Q701N4 177 aa1.52□□□□□ -2.17
EWSR1-220ENST00000493426 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
EWSR1-220ENST00000493426 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
EWSR1-220ENST00000493426 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
EWSR1-220ENST00000493426 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
EWSR1-220ENST00000493426 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
EWSR1-220ENST00000493426 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
EWSR1-220ENST00000493426 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
EWSR1-220ENST00000493426 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
EWSR1-220ENST00000493426 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 114.3 ms