RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
CSTF1-206ENST00000493039 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
CSTF1-206ENST00000493039 KMT2DO14686 5537 aa3.8□□□□□ -1.8
CSTF1-206ENST00000493039 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
CSTF1-206ENST00000493039 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
CSTF1-206ENST00000493039 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
CSTF1-206ENST00000493039 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
CSTF1-206ENST00000493039 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
CSTF1-206ENST00000493039 TNP1P09430 55 aa3.6□□□□□ -1.83
CSTF1-206ENST00000493039 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.83
CSTF1-206ENST00000493039 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.84
CSTF1-206ENST00000493039 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
CSTF1-206ENST00000493039 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
CSTF1-206ENST00000493039 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
CSTF1-206ENST00000493039 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
CSTF1-206ENST00000493039 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
CSTF1-206ENST00000493039 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
CSTF1-206ENST00000493039 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
CSTF1-206ENST00000493039 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
CSTF1-206ENST00000493039 NEBP20929 6669 aa3.46□□□□□ -1.86
CSTF1-206ENST00000493039 MT1EP04732 61 aa3.45□□□□□ -1.86
CSTF1-206ENST00000493039 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
CSTF1-206ENST00000493039 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
CSTF1-206ENST00000493039 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
CSTF1-206ENST00000493039 SPRR2EP22531 72 aa3.38□□□□□ -1.87
CSTF1-206ENST00000493039 SPRR2BP35325 72 aa3.38□□□□□ -1.87
CSTF1-206ENST00000493039 SPRR2AP35326 72 aa3.38□□□□□ -1.87
CSTF1-206ENST00000493039 KRTAP19-4Q3LI73 84 aa3.37□□□□□ -1.87
CSTF1-206ENST00000493039 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
CSTF1-206ENST00000493039 MT1LQ93083 61 aa3.35□□□□□ -1.87
CSTF1-206ENST00000493039 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
CSTF1-206ENST00000493039 MT1GP13640 62 aa3.29□□□□□ -1.88
CSTF1-206ENST00000493039 MT1MQ8N339 61 aa3.25□□□□□ -1.89
CSTF1-206ENST00000493039 SPRR2DP22532 72 aa3.25□□□□□ -1.89
CSTF1-206ENST00000493039 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
CSTF1-206ENST00000493039 KRTAP2-3P0C7H8 128 aa3.16□□□□□ -1.9
CSTF1-206ENST00000493039 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
CSTF1-206ENST00000493039 KRTAP2-4Q9BYR9 128 aa3.16□□□□□ -1.9
CSTF1-206ENST00000493039 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
CSTF1-206ENST00000493039 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
CSTF1-206ENST00000493039 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
CSTF1-206ENST00000493039 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
CSTF1-206ENST00000493039 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
CSTF1-206ENST00000493039 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
CSTF1-206ENST00000493039 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
CSTF1-206ENST00000493039 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
CSTF1-206ENST00000493039 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
CSTF1-206ENST00000493039 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.94
CSTF1-206ENST00000493039 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
CSTF1-206ENST00000493039 MT4P47944 62 aa2.85□□□□□ -1.95
CSTF1-206ENST00000493039 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.96
CSTF1-206ENST00000493039 MT1AP04731 61 aa2.83□□□□□ -1.96
CSTF1-206ENST00000493039 MT3P25713 68 aa2.78□□□□□ -1.96
CSTF1-206ENST00000493039 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
CSTF1-206ENST00000493039 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.98
CSTF1-206ENST00000493039 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
CSTF1-206ENST00000493039 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
CSTF1-206ENST00000493039 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
CSTF1-206ENST00000493039 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
CSTF1-206ENST00000493039 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
CSTF1-206ENST00000493039 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
CSTF1-206ENST00000493039 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
CSTF1-206ENST00000493039 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
CSTF1-206ENST00000493039 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
CSTF1-206ENST00000493039 PRM1P04553 51 aa2.49□□□□□ -2.01
CSTF1-206ENST00000493039 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
CSTF1-206ENST00000493039 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
CSTF1-206ENST00000493039 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.04
CSTF1-206ENST00000493039 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
CSTF1-206ENST00000493039 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
CSTF1-206ENST00000493039 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
CSTF1-206ENST00000493039 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
CSTF1-206ENST00000493039 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
CSTF1-206ENST00000493039 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
CSTF1-206ENST00000493039 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
CSTF1-206ENST00000493039 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CSTF1-206ENST00000493039 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
CSTF1-206ENST00000493039 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms