RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 SPRR2EP22531 72 aa7.87□□□□□ -1.15
PSPC1-204ENST00000492741 SPRR2BP35325 72 aa7.87□□□□□ -1.15
PSPC1-204ENST00000492741 SPRR2AP35326 72 aa7.87□□□□□ -1.15
PSPC1-204ENST00000492741 MT1LQ93083 61 aa7.86□□□□□ -1.15
PSPC1-204ENST00000492741 LCE1AQ5T7P2 110 aa7.83□□□□□ -1.16
PSPC1-204ENST00000492741 KRTAP19-3Q7Z4W3 81 aa7.83□□□□□ -1.16
PSPC1-204ENST00000492741 MDN1Q9NU22 5596 aa7.81□□□□□ -1.16
PSPC1-204ENST00000492741 MT1GP13640 62 aa7.75□□□□□ -1.17
PSPC1-204ENST00000492741 LCE5AQ5TCM9 118 aa7.72□□□□□ -1.17
PSPC1-204ENST00000492741 KRTAP19-4Q3LI73 84 aa7.66□□□□□ -1.18
PSPC1-204ENST00000492741 MT1MQ8N339 61 aa7.62□□□□□ -1.19
PSPC1-204ENST00000492741 SPRR2DP22532 72 aa7.59□□□□□ -1.19
PSPC1-204ENST00000492741 LCE3CQ5T5A8 94 aa7.59□□□□□ -1.19
PSPC1-204ENST00000492741 KRTAP4-7Q9BYR0 210 aa7.58□□□□□ -1.2
PSPC1-204ENST00000492741 NEBP20929 6669 aa7.5□□□□□ -1.21
PSPC1-204ENST00000492741 KRTAP4-3Q9BYR4 195 aa7.47□□□□□ -1.21
PSPC1-204ENST00000492741 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
PSPC1-204ENST00000492741 DSTQ03001 7570 aaKnown RBP7.28□□□□□ -1.24
PSPC1-204ENST00000492741 KRTAP2-3P0C7H8 128 aa7.24□□□□□ -1.25
PSPC1-204ENST00000492741 KRTAP2-4Q9BYR9 128 aa7.24□□□□□ -1.25
PSPC1-204ENST00000492741 KRTAP20-1Q3LI63 56 aa7.21□□□□□ -1.25
PSPC1-204ENST00000492741 SPRR5A0A1B0GTR4 108 aa7.18□□□□□ -1.26
PSPC1-204ENST00000492741 LOC100996750A0A140TA64 210 aa7.13□□□□□ -1.27
PSPC1-204ENST00000492741 KRTAP9-6A8MVA2 160 aa7.13□□□□□ -1.27
PSPC1-204ENST00000492741 KRTAP2-2Q9BYT5 123 aa7.07□□□□□ -1.28
PSPC1-204ENST00000492741 KRTAP2-1Q9BYU5 128 aa7.07□□□□□ -1.28
PSPC1-204ENST00000492741 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
PSPC1-204ENST00000492741 KRTAP5-5Q701N2 237 aaPredicted RBP6.87□□□□□ -1.31
PSPC1-204ENST00000492741 LCE4AQ5TA78 99 aa6.72□□□□□ -1.33
PSPC1-204ENST00000492741 KRTAP5-4Q6L8H1 288 aa6.71□□□□□ -1.34
PSPC1-204ENST00000492741 MT1AP04731 61 aa6.68□□□□□ -1.34
PSPC1-204ENST00000492741 KRTAP6-1Q3LI64 71 aa6.63□□□□□ -1.35
PSPC1-204ENST00000492741 MT4P47944 62 aa6.61□□□□□ -1.35
PSPC1-204ENST00000492741 KRTAP4-9Q9BYQ8 210 aa6.61□□□□□ -1.35
PSPC1-204ENST00000492741 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
PSPC1-204ENST00000492741 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
PSPC1-204ENST00000492741 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
PSPC1-204ENST00000492741 NDUFAF8A1L188 74 aa6.46□□□□□ -1.38
PSPC1-204ENST00000492741 SYNE1Q8NF91 8797 aaKnown RBP6.45□□□□□ -1.38
PSPC1-204ENST00000492741 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
PSPC1-204ENST00000492741 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
PSPC1-204ENST00000492741 HMCN1Q96RW7 5635 aa6.32□□□□□ -1.4
PSPC1-204ENST00000492741 KRTAP6-2Q3LI66 62 aa6.18□□□□□ -1.42
PSPC1-204ENST00000492741 H3BS24 57 aa6.11□□□□□ -1.43
PSPC1-204ENST00000492741 MT3P25713 68 aa6.11□□□□□ -1.43
PSPC1-204ENST00000492741 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
PSPC1-204ENST00000492741 KRTAP5-2Q701N4 177 aa6.02□□□□□ -1.45
PSPC1-204ENST00000492741 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
PSPC1-204ENST00000492741 LCE3DQ9BYE3 92 aa5.67□□□□□ -1.5
PSPC1-204ENST00000492741 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
PSPC1-204ENST00000492741 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
PSPC1-204ENST00000492741 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
PSPC1-204ENST00000492741 KRTAP5-10Q6L8G5 202 aa5.57□□□□□ -1.52
PSPC1-204ENST00000492741 LCE3EQ5T5B0 92 aa5.47□□□□□ -1.53
PSPC1-204ENST00000492741 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
PSPC1-204ENST00000492741 KRTAP5-8O75690 187 aa5.34□□□□□ -1.55
PSPC1-204ENST00000492741 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
PSPC1-204ENST00000492741 INE1O15225 51 aa5.3□□□□□ -1.56
PSPC1-204ENST00000492741 KRTAP5-1Q6L8H4 278 aa5.27□□□□□ -1.57
PSPC1-204ENST00000492741 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
PSPC1-204ENST00000492741 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
PSPC1-204ENST00000492741 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
PSPC1-204ENST00000492741 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
PSPC1-204ENST00000492741 LCE1CQ5T751 118 aa4.97□□□□□ -1.61
PSPC1-204ENST00000492741 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
PSPC1-204ENST00000492741 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
PSPC1-204ENST00000492741 PRM1P04553 51 aa4.61□□□□□ -1.67
PSPC1-204ENST00000492741 MUC5BQ9HC84 5762 aaPredicted RBP4.6□□□□□ -1.67
PSPC1-204ENST00000492741 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
PSPC1-204ENST00000492741 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
PSPC1-204ENST00000492741 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
PSPC1-204ENST00000492741 KRTAP21-2Q3LI59 83 aa4.32□□□□□ -1.72
PSPC1-204ENST00000492741 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
PSPC1-204ENST00000492741 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
PSPC1-204ENST00000492741 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
PSPC1-204ENST00000492741 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
PSPC1-204ENST00000492741 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
PSPC1-204ENST00000492741 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 27.6 ms